ModCRE DB

Transcription factor

F6TDF5 - ZEB1

Zinc finger E-box-binding homeobox 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 289 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07842_2.00 Known CisBP CTCACCTG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 289 aa
173-288

Region 173-288 0 PWM

Residues
116 aa
Domains
PF05605 · Drought induced 19 protein (Di19), zinc-binding PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5KKQ
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 173-2881 model
Actions
Predicted = Low TFS_F6TDF5:173:288_5kkq_A_1 5kkq 173-288 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
171-223PF05605Drought induced 19 protein (Di19), zinc-bindingoverlaps 173-288
241-263PF00096Zinc finger, C2H2 typeoverlaps 173-288
269-288PF00096Zinc finger, C2H2 typeoverlaps 173-288