ModCRE DB

Transcription factor

F6V242 - SREBF1

Sterol regulatory element-binding protein 1 (Sterol regulatory element-binding transcription factor 1)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 325 aa

6 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
MA0595.1 NN 70+% JASPAR ATCACCCCAC 99.3% identity Open · Scan
M03626_2.00 NN 70+% CisBP ATCACGTGAT 82.1% identity Open · Scan
M01724_2.00 NN 70+% CisBP ATCACGCGA 72.6% identity Open · Scan
MA0829.1 NN 70+% JASPAR ATCACGTGAC 72.2% identity Open · Scan
Nearest Neighbor (70% - 40%)2
MotifPredictionSourceDNA bindingSupportLogoActions
MA0596.1 NN 70-40% JASPAR ATGGGGTGAT 51.5% identity Open · Scan
M08752_2.00 NN 70-40% CisBP CCTCACCCCACCC 50.8% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 325 aa
293-324

Region 293-324 0 PWM

Residues
32 aa
Domains
PF00010 · Helix-loop-helix DNA-binding domain
3D models
1 active PDB
Templates
1HLO
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 293-3241 model
Actions
Predicted = Low DIMER_F6V242:293:324_1hlo_A_1 1hlo 293-324 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
298-324PF00010Helix-loop-helix DNA-binding domainoverlaps 293-324