ModCRE DB

Transcription factor

F8VWZ5 - HLX

H2.0-like homeobox protein (Homeobox protein HLX1)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 151 aa

106 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M06489_2.00 NN 70+% CisBP TTAATTA 82.8% identity Open · Scan
M02128_2.00 NN 70+% CisBP ATTAATTA 77.1% identity Open · Scan
M00451_2.00 NN 70+% CisBP ATTAATTA 73.6% identity Open · Scan
Nearest Neighbor (70% - 40%)103
MotifPredictionSourceDNA bindingSupportLogoActions
M02107_2.00 NN 70-40% CisBP TTAATTGCT 64.8% identity Open · Scan
M09181_2.00 NN 70-40% CisBP TTTAATTGTTTT 64.8% identity Open · Scan
MA0875.1 NN 70-40% JASPAR GCAATTAG 64.8% identity Open · Scan
M00457_2.00 NN 70-40% CisBP TTAATTGCT 61.1% identity Open · Scan
MA1471.1 NN 70-40% JASPAR AAAAACCATTAC 61.1% identity Open · Scan
M06232_2.00 NN 70-40% CisBP TTAATGA 58.9% identity Open · Scan
MA0876.1 NN 70-40% JASPAR CCAATTAA 58.9% identity Open · Scan
MA0119.1 NN 70-40% JASPAR TGGCACCATGCCAA 58.4% identity Open · Scan
MA0618.1 NN 70-40% JASPAR TTAATTAG 57.8% identity Open · Scan
M03814_2.00 NN 70-40% CisBP GTAATGGC 56.8% identity Open · Scan
M06539_2.00 NN 70-40% CisBP CTAATTA 56.6% identity Open · Scan
M09582_2.00 NN 70-40% CisBP ATGATTGATG 56.5% identity Open · Scan
MA0635.1 NN 70-40% JASPAR GCTAAACGGT 55.5% identity Open · Scan
M00526_2.00 NN 70-40% CisBP ATTAATTA 55.1% identity Open · Scan
M06290_2.00 NN 70-40% CisBP TTTAATTA 55.1% identity Open · Scan
MA1577.1 NN 70-40% JASPAR CTAATTAG 55.1% identity Open · Scan
M05105_2.00 NN 70-40% CisBP GTCGTAAAAT 55.0% identity Open · Scan
MA0485.1 NN 70-40% JASPAR GGCCATAAATCAC 55.0% identity Open · Scan
MA0485.2 NN 70-40% JASPAR GTCGTAAAAT 55.0% identity Open · Scan
MA0594.1 NN 70-40% JASPAR GCCATAAATCA 55.0% identity Open · Scan
MA0594.2 NN 70-40% JASPAR GTCGTAAACG 55.0% identity Open · Scan
MA0913.1 NN 70-40% JASPAR GCAATAAAAA 55.0% identity Open · Scan
MA0913.2 NN 70-40% JASPAR GCAATAAAAC 55.0% identity Open · Scan
M06545_2.00 NN 70-40% CisBP TTAATTA 54.9% identity Open · Scan
M02153_2.00 NN 70-40% CisBP GCCCAATAAA 54.7% identity Open · Scan
M02166_2.00 NN 70-40% CisBP CTAATTAC 54.7% identity Open · Scan
M06359_2.00 NN 70-40% CisBP TTTAATTA 53.8% identity Open · Scan
M06504_2.00 NN 70-40% CisBP TTAAGTG 53.8% identity Open · Scan
MA0877.1 NN 70-40% JASPAR GCTAATTGCT 53.7% identity Open · Scan
MA0877.2 NN 70-40% JASPAR CTAAACGG 53.7% identity Open · Scan
M02165_2.00 NN 70-40% CisBP CTTAATTGG 53.5% identity Open · Scan
MA0886.1 NN 70-40% JASPAR GCTAATTAGC 53.5% identity Open · Scan
M06361_2.00 NN 70-40% CisBP TTTAATTA 53.4% identity Open · Scan
MA1530.1 NN 70-40% JASPAR CTCATTAAA 53.4% identity Open · Scan
M01250_2.00 NN 70-40% CisBP TCAATAATTG 53.3% identity Open · Scan
M06910_2.00 NN 70-40% CisBP TCAATAATTGA 53.3% identity Open · Scan
M09573_2.00 NN 70-40% CisBP GTTAATGA 53.3% identity Open · Scan
MA0674.1 NN 70-40% JASPAR GTAATTAA 53.3% identity Open · Scan
M00492_2.00 NN 70-40% CisBP TAATTAGC 52.9% identity Open · Scan
M03832_2.00 NN 70-40% CisBP GGTAATTACC 52.9% identity Open · Scan
M05100_2.00 NN 70-40% CisBP TTAACGAC 52.9% identity Open · Scan
M09676_2.00 NN 70-40% CisBP TTAATGA 52.9% identity Open · Scan
MA0651.1 NN 70-40% JASPAR GGTCGTAAAAT 52.9% identity Open · Scan
M05019_2.00 NN 70-40% CisBP GGTCGTAAAAC 52.8% identity Open · Scan
M09186_2.00 NN 70-40% CisBP ACATAAAT 52.8% identity Open · Scan
M10761_2.00 NN 70-40% CisBP CATAAAT 52.8% identity Open · Scan
MA0878.1 NN 70-40% JASPAR GCAATAAAA 52.8% identity Open · Scan
M00465_2.00 NN 70-40% CisBP TTAATTAG 52.6% identity Open · Scan
M03815_2.00 NN 70-40% CisBP TTAATTAG 52.6% identity Open · Scan
MA0675.1 NN 70-40% JASPAR CTAATTAA 52.6% identity Open · Scan
M00410_2.00 NN 70-40% CisBP TTTTATGACC 52.5% identity Open · Scan
M01245_2.00 NN 70-40% CisBP TTTTATTACC 52.5% identity Open · Scan
M03253_2.00 NN 70-40% CisBP TTTTTATTAC 52.5% identity Open · Scan
M05394_2.00 NN 70-40% CisBP GGTCGTAAAAC 52.5% identity Open · Scan
M09170_2.00 NN 70-40% CisBP TCATAAATCATC 52.5% identity Open · Scan
MA0899.1 NN 70-40% JASPAR GGTAATAAAAA 52.5% identity Open · Scan
MA0905.1 NN 70-40% JASPAR GTCGTAAAAT 52.5% identity Open · Scan
MA1503.1 NN 70-40% JASPAR GTCGTAAAAT 52.5% identity Open · Scan
MA1506.1 NN 70-40% JASPAR GGTCGTAAAAC 52.5% identity Open · Scan
MA0124.1 NN 70-40% JASPAR ATACTTA 52.3% identity Open · Scan
M03810_2.00 NN 70-40% CisBP GCTAAACGGT 51.8% identity Open · Scan
M00520_2.00 NN 70-40% CisBP CTTAAGTGCT 51.7% identity Open · Scan
M03152_2.00 NN 70-40% CisBP TAATTAGCTAATTA 51.7% identity Open · Scan
MA0612.1 NN 70-40% JASPAR CCTAATTACC 51.7% identity Open · Scan
MA0122.1 NN 70-40% JASPAR TTAAGTGGA 51.6% identity Open · Scan
MA0122.2 NN 70-40% JASPAR ACCACTTAA 51.6% identity Open · Scan
MA0124.2 NN 70-40% JASPAR ACCACTTAA 51.6% identity Open · Scan
M02220_2.00 NN 70-40% CisBP CAATCATTGG 51.1% identity Open · Scan
M06900_2.00 NN 70-40% CisBP TCAATAATTAA 51.1% identity Open · Scan
M00474_2.00 NN 70-40% CisBP TTTATGACC 50.9% identity Open · Scan
M02150_2.00 NN 70-40% CisBP TTAATTAA 50.9% identity Open · Scan
M02179_2.00 NN 70-40% CisBP GCTAATTAC 50.9% identity Open · Scan
M02211_2.00 NN 70-40% CisBP TTAATTAC 50.9% identity Open · Scan
M03777_2.00 NN 70-40% CisBP GTAATTGC 50.9% identity Open · Scan
M04959_2.00 NN 70-40% CisBP GTAATTAC 50.9% identity Open · Scan
M06241_2.00 NN 70-40% CisBP CGTTAATTATTT 50.9% identity Open · Scan
M09196_2.00 NN 70-40% CisBP TTGATGGATG 50.9% identity Open · Scan
M10741_2.00 NN 70-40% CisBP AACTAATTACCATTATCG 50.9% identity Open · Scan
M10805_2.00 NN 70-40% CisBP GGACAAATAGCCC 50.9% identity Open · Scan
MA0465.1 NN 70-40% JASPAR AAGCCATAAAA 50.9% identity Open · Scan
MA0854.1 NN 70-40% JASPAR CGAATTAATTAATCACC 50.9% identity Open · Scan
MA0887.1 NN 70-40% JASPAR GGTAATTAGC 50.9% identity Open · Scan
MA0888.1 NN 70-40% JASPAR GGTAATTAGC 50.9% identity Open · Scan
MA0908.1 NN 70-40% JASPAR GTCGTAAAAA 50.9% identity Open · Scan
MA0911.1 NN 70-40% JASPAR GGTCGTAAAATT 50.9% identity Open · Scan
MA1495.1 NN 70-40% JASPAR GTAATTAC 50.9% identity Open · Scan
M00497_2.00 NN 70-40% CisBP TTAAGTGGT 50.8% identity Open · Scan
M05042_2.00 NN 70-40% CisBP GTCAAGTGGT 50.8% identity Open · Scan
M06544_2.00 NN 70-40% CisBP GTAATTA 50.8% identity Open · Scan
MA0672.1 NN 70-40% JASPAR ACCACTTGAA 50.8% identity Open · Scan
MA0902.1 NN 70-40% JASPAR AGTAATTAAC 50.8% identity Open · Scan
M00496_2.00 NN 70-40% CisBP TTAAGTGGTT 50.0% identity Open · Scan
M00538_2.00 NN 70-40% CisBP TTTTATGACC 50.0% identity Open · Scan
M02106_2.00 NN 70-40% CisBP ATATTAATTGGTT 50.0% identity Open · Scan
M02196_2.00 NN 70-40% CisBP TTAATTAC 50.0% identity Open · Scan
M05392_2.00 NN 70-40% CisBP GTTAAGTGC 50.0% identity Open · Scan
M06227_2.00 NN 70-40% CisBP TTAATTAT 50.0% identity Open · Scan
M06554_2.00 NN 70-40% CisBP TTAATTG 50.0% identity Open · Scan
M06914_2.00 NN 70-40% CisBP ACAATAATTGA 50.0% identity Open · Scan
M10754_2.00 NN 70-40% CisBP CAAGTGCGTG 50.0% identity Open · Scan
MA0699.1 NN 70-40% JASPAR GCCAATTAGC 50.0% identity Open · Scan
MA0873.1 NN 70-40% JASPAR AGTCGTAAAAA 50.0% identity Open · Scan
MA0898.1 NN 70-40% JASPAR ACAAGCAATTAAAGAAT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 151 aa
13-63

Region 13-63 0 PWM

Residues
51 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1B72
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 13-631 model
Actions
Predicted = Low DIMER_F8VWZ5:13:63_1b72_A_1 1b72 13-63 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
12-66PF00046Homeodomainoverlaps 13-63