ModCRE DB

Transcription factor

F8VXY9 - DMTF1

Cyclin-D-binding Myb-like transcription factor 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 378 aa

5 Generated PWM 5 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_F8VXY9_F8VXY9_HUMAN:204:325_5eyb_A_1 ModCRE Homology model TTACCCCTTAGCGCCCC Region 204-325 · 1 3D model Open · Scan
TFS_tr_F8VXY9_F8VXY9_HUMAN:226:290_3osf_A_1 ModCRE Homology model CTGAAAAGTTGGA Region 226-290 · 1 3D model Open · Scan
TFS_tr_F8VXY9_F8VXY9_HUMAN:226:290_3osg_A_1 ModCRE Homology model CTTAAACGTTTT Region 226-290 · 1 3D model Open · Scan
TFS_tr_F8VXY9_F8VXY9_HUMAN:226:344_1h88_C_1 ModCRE Homology model CTCCTAAGGGGAATG Region 226-344 · 1 3D model Open · Scan
TFS_tr_F8VXY9_F8VXY9_HUMAN:306:344_1h8a_C_1 ModCRE Homology model GCCCAAACCTCAGGT Region 306-344 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 378 aa
204-344

Region 204-344 5 PWM

Residues
141 aa
Domains
PF00249 · Myb-like DNA-binding domain PF00249 · Myb-like DNA-binding domain
3D models
5 active PDBs · 5 summary rows
Templates
1H88, 1H8A, 3OSF, 3OSG, 5EYB
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models 5 summary rows
Region 204-3445 models · 5 summary rows
Actions
Predicted = Low TFS_tr_F8VXY9_F8VXY9_HUMAN:204:325_5eyb_A_1 5eyb 204-325 View model · PDB
Predicted = Low TFS_tr_F8VXY9_F8VXY9_HUMAN:226:290_3osf_A_1 3osf 226-290 View model · PDB
Predicted = Low TFS_tr_F8VXY9_F8VXY9_HUMAN:226:290_3osg_A_1 3osg 226-290 View model · PDB
Predicted = Low TFS_tr_F8VXY9_F8VXY9_HUMAN:226:344_1h88_C_1 1h88 226-344 View model · PDB
Predicted = Low TFS_tr_F8VXY9_F8VXY9_HUMAN:306:344_1h8a_C_1 1h8a 306-344 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 1h8a 181:360 306 344 P:C · DNA:D,E 38.5% / 64.1% 36 View · PDB TFS_tr_F8VXY9_F8VXY9_HUMAN:306:344_1h8a_C_1
2 3osf 181:360 226 290 P:A · DNA:B,C 35.8% / 53.7% 63 View · PDB TFS_tr_F8VXY9_F8VXY9_HUMAN:226:290_3osf_A_1
4 3osg 181:360 226 290 P:A · DNA:B,C 35.8% / 53.7% 59 View · PDB TFS_tr_F8VXY9_F8VXY9_HUMAN:226:290_3osg_A_1
3 1h88 181:360 226 344 P:C · DNA:D,E 30.3% / 53.3% 71 View · PDB TFS_tr_F8VXY9_F8VXY9_HUMAN:226:344_1h88_C_1
1 5eyb 181:360 204 325 P:A · DNA:C,D 29.6% / 48.8% 32 View · PDB TFS_tr_F8VXY9_F8VXY9_HUMAN:204:325_5eyb_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
78-156PF20588Cyclin-D-binding Myb-like transcription factor 1 N-terminalNo overlap with loaded model regions
225-265PF00249Myb-like DNA-binding domainoverlaps 204-344
274-329PF00249Myb-like DNA-binding domainoverlaps 204-344