ModCRE DB

Transcription factor

F8WD46 - ZNF10

Zinc finger protein 10

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 439 aa

77 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)5
MotifPredictionSourceDNA bindingSupportLogoActions
M00943_2.00 NN 70+% CisBP CCCGCTGC 71.4% identity Open · Scan
M00960_2.00 NN 70+% CisBP TGCATCCC 71.4% identity Open · Scan
M00959_2.00 NN 70+% CisBP GCCCTCCC 70.5% identity Open · Scan
M00950_2.00 NN 70+% CisBP GCAGCCCA 70.2% identity Open · Scan
M00952_2.00 NN 70+% CisBP GGATGCTC 70.2% identity Open · Scan
Nearest Neighbor (70% - 40%)72
MotifPredictionSourceDNA bindingSupportLogoActions
M00948_2.00 NN 70-40% CisBP GCAGCACC 69.0% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 68.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 67.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 67.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 67.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 61.9% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 61.1% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 60.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 59.1% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 58.8% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 58.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 58.7% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 58.0% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 57.3% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 56.6% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 56.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 56.3% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 56.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 56.2% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 56.2% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 55.9% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 55.9% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 55.9% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.8% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 55.8% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 55.7% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 55.4% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 55.2% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 55.2% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 54.9% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 54.8% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 54.7% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 54.7% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 54.5% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 54.5% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 54.2% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 54.2% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 54.2% identity Open · Scan
M08234_2.00 NN 70-40% CisBP GTCAACTTGACTGGGCCA 54.1% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 53.9% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 53.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 53.8% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 53.7% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 53.2% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 53.2% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 53.2% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 53.1% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 53.0% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 52.9% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 52.8% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.7% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 52.6% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 52.5% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 52.5% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 52.4% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 52.2% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 52.1% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 52.0% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 52.0% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 51.7% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 51.7% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.4% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.3% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 51.3% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 51.3% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 51.3% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 51.2% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 51.1% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 50.9% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 50.6% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 50.0% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 439 aa
127-406

Region 127-406 0 PWM

Residues
280 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 127-4061 model
Actions
Predicted = Low TFS_F8WD46:127:406_5wjq_D_1 5wjq 127-406 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
13-54PF01352KRAB boxNo overlap with loaded model regions
159-181PF00096Zinc finger, C2H2 typeoverlaps 127-406
187-209PF00096Zinc finger, C2H2 typeoverlaps 127-406
230-254PF13465Zinc-finger double domainoverlaps 127-406
271-293PF00096Zinc finger, C2H2 typeoverlaps 127-406
299-321PF00096Zinc finger, C2H2 typeoverlaps 127-406
327-349PF00096Zinc finger, C2H2 typeoverlaps 127-406
355-377PF00096Zinc finger, C2H2 typeoverlaps 127-406
383-405PF00096Zinc finger, C2H2 typeoverlaps 127-406