Region 222-269 0 PWM
- Residues
- 48 aa
- Domains
- PF00046 · Homeodomain
- 3D models
- 1 active PDB
- Templates
- 4QTR
- Sources
- Structure model
Transcription factor
G3V2N2 - SIX4
SIX homeobox 4
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 494 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M04940_2.00 | Known | CisBP | CCGTATCATT | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
494 aa
222-269
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 222-2691 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_G3V2N2:222:269_4qtr_A_1 | 4qtr | 222-269 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 100-210 | PF16878 | Transcriptional regulator, SIX1, N-terminal SD domain | No overlap with loaded model regions |
| 221-272 | PF00046 | Homeodomain | overlaps 222-269 |