ModCRE DB

Transcription factor

G5E9B8 - ZNF180

Zinc finger protein 180

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 667 aa

128 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)8
MotifPredictionSourceDNA bindingSupportLogoActions
M00960_2.00 NN 70+% CisBP TGCATCCC 75.2% identity Open · Scan
M00950_2.00 NN 70+% CisBP GCAGCCCA 74.1% identity Open · Scan
M00952_2.00 NN 70+% CisBP GGATGCTC 74.1% identity Open · Scan
M00943_2.00 NN 70+% CisBP CCCGCTGC 72.9% identity Open · Scan
M00948_2.00 NN 70+% CisBP GCAGCACC 71.7% identity Open · Scan
M00959_2.00 NN 70+% CisBP GCCCTCCC 71.7% identity Open · Scan
M00944_2.00 NN 70+% CisBP TCGCTATAA 70.5% identity Open · Scan
M00953_2.00 NN 70+% CisBP ATCTATAT 70.5% identity Open · Scan
Nearest Neighbor (70% - 40%)120
MotifPredictionSourceDNA bindingSupportLogoActions
M00958_2.00 NN 70-40% CisBP CGGCATCCC 69.4% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 68.2% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 65.8% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 64.0% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 63.0% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 62.2% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 62.2% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 62.1% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 62.1% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 62.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 62.0% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 61.9% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 61.6% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 61.5% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 61.2% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 61.1% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 60.7% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 60.6% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 60.5% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 59.7% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 59.4% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 59.3% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 59.2% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 59.1% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 59.1% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 59.0% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 59.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 58.2% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 58.2% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 57.7% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 57.6% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 57.5% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 57.3% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 57.0% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 57.0% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 56.5% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 56.5% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 56.5% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 56.4% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 56.2% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 56.2% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 56.2% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 56.2% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 55.9% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 55.9% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.9% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 55.9% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 55.8% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 55.7% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 55.7% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 55.6% identity Open · Scan
M04615_2.00 NN 70-40% CisBP CTCGATCGAAGGGCACAGTCATT 55.4% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 55.4% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 55.3% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 55.2% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 55.1% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 55.1% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 55.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 55.0% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 55.0% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 55.0% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 55.0% identity Open · Scan
MA0130.1 NN 70-40% JASPAR ATCCAC 55.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 55.0% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 54.9% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 54.8% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 54.8% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 54.6% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 54.6% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 54.5% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 54.4% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 54.3% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 54.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 54.2% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 54.0% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 53.9% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 53.9% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 53.9% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 53.8% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 53.4% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 53.3% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 53.3% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 53.2% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 53.2% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 53.0% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 52.9% identity Open · Scan
M07662_2.00 NN 70-40% CisBP CCTGTGTCCTCCCTGGTCCCC 52.8% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 52.6% identity Open · Scan
M07701_2.00 NN 70-40% CisBP CCTGGGCTAGGCCCTGGC 52.6% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 52.6% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 52.6% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 52.6% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 52.4% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 52.2% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 52.1% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 51.9% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 51.9% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 51.7% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 51.5% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 51.5% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 51.5% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 51.2% identity Open · Scan
MA1593.1 NN 70-40% JASPAR TAACAGCAGACT 51.2% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 51.1% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 50.9% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 50.9% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 50.7% identity Open · Scan
M07720_2.00 NN 70-40% CisBP TGTGTGTGTGGGCATGTGTGTGTGCGAGT 50.5% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 50.4% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 50.3% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 50.3% identity Open · Scan
M07654_2.00 NN 70-40% CisBP TGCCCCCTGGTGGC 50.1% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 50.1% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 50.1% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 50.0% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 50.0% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 50.0% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 50.0% identity Open · Scan
MA0750.1 NN 70-40% JASPAR GGCGACCACCGA 50.0% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 667 aa
325-435

Region 325-435 0 PWM

Residues
111 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5EGB
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 325-4351 model
Actions
Predicted = Low TFS_G5E9B8:325:435_5egb_A_1 5egb 325-435 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
47-87PF01352KRAB boxNo overlap with loaded model regions
328-350PF00096Zinc finger, C2H2 typeoverlaps 325-435
356-378PF00096Zinc finger, C2H2 typeoverlaps 325-435
384-406PF00096Zinc finger, C2H2 typeoverlaps 325-435
412-434PF00096Zinc finger, C2H2 typeoverlaps 325-435
440-462PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
468-490PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
496-518PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
524-546PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
553-578PF23561C2H2 zinc fingerNo overlap with loaded model regions
580-602PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
608-630PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
636-658PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions