ModCRE DB

Transcription factor

H0Y4W6 - ESR1

Estrogen receptor 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 310 aa

22 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
MA0112.1 NN 70+% JASPAR CCAGGTCACCGTGACCCC 99.6% identity Open · Scan
M09309_2.00 NN 70+% CisBP AGGTCAGGGTGACCT 94.3% identity Open · Scan
Nearest Neighbor (70% - 40%)20
MotifPredictionSourceDNA bindingSupportLogoActions
MA0258.1 NN 70-40% JASPAR CAAGGTCACGGTGACCTG 61.1% identity Open · Scan
M09275_2.00 NN 70-40% CisBP GGGTCACTTCAGGTCAG 60.0% identity Open · Scan
M03923_2.00 NN 70-40% CisBP AGAACACTGTGTACC 55.5% identity Open · Scan
M02392_2.00 NN 70-40% CisBP GAGGTCAA 55.2% identity Open · Scan
M06417_2.00 NN 70-40% CisBP CAGTCCGAAGGTCACCGC 55.0% identity Open · Scan
M09609_2.00 NN 70-40% CisBP CCAGGAACAG 54.8% identity Open · Scan
MA1574.1 NN 70-40% JASPAR GGGGTCAAAGGTCAT 52.9% identity Open · Scan
M01298_2.00 NN 70-40% CisBP AAAGGTCA 52.7% identity Open · Scan
M03927_2.00 NN 70-40% CisBP GAAACTAGAGCA 52.5% identity Open · Scan
M05590_2.00 NN 70-40% CisBP TTCAAGGTCAC 52.5% identity Open · Scan
M09616_2.00 NN 70-40% CisBP TTCAAGGTCA 52.5% identity Open · Scan
MA0505.1 NN 70-40% JASPAR AAGTTCAAGGTCAGC 52.5% identity Open · Scan
MA1540.1 NN 70-40% JASPAR GTCAAGGTCAC 52.5% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 51.7% identity Open · Scan
M02408_2.00 NN 70-40% CisBP TGAGGTCAATTT 50.6% identity Open · Scan
M05669_2.00 NN 70-40% CisBP GAGGTCAT 50.6% identity Open · Scan
MA0504.1 NN 70-40% JASPAR AGGGGTCAGAGGTCA 50.6% identity Open · Scan
M00690_2.00 NN 70-40% CisBP AAAGATCAAA 50.0% identity Open · Scan
M03426_2.00 NN 70-40% CisBP GGGGTCAAAGTCCAAT 50.0% identity Open · Scan
MA1148.1 NN 70-40% JASPAR ATGTAGGTCAAAGGTCAT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 310 aa
10-80

Region 10-80 0 PWM

Residues
71 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
4OND
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 10-801 model
Actions
Predicted = Low DIMER_H0Y4W6:10:80_4ond_B_1 4ond 10-80 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
11-79PF00105Double treble clef zinc finger, C4 typeoverlaps 10-80
164-288PF00104Ligand-binding domain of nuclear hormone receptorNo overlap with loaded model regions