Region 2-100 0 PWM
- Residues
- 99 aa
- Domains
- PF00352 · Transcription factor TFIID (or TATA-binding protein, TBP)
- 3D models
- 1 active PDB
- Templates
- 1JFI
- Sources
- Structure model
Transcription factor
H0Y6D8 - TBP
TATA-box binding protein
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 101 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)3
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M00216_2.00 | NN 70+% | CisBP | TTTATAT | 88.4% identity | Open · Scan | |
| MA0108.2 | NN 70+% | JASPAR | GTATAAAAGGCGGGG | 88.4% identity | Open · Scan | |
| M01567_2.00 | NN 70+% | CisBP | AATATAT | 70.2% identity | Open · Scan |
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
101 aa
2-100
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 2-1001 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_H0Y6D8:2:100_1jfi_C_1 | 1jfi | 2-100 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 27-96 | PF00352 | Transcription factor TFIID (or TATA-binding protein, TBP) | overlaps 2-100 |