Region 170-206 5 PWM
- Residues
- 37 aa
- Domains
- PF00096 · Zinc finger, C2H2 type
- 3D models
- 5 active PDBs · 5 summary rows
- Templates
- 1A1F, 1A1G, 1G2F, 1TF3, 2DRP
- Sources
- Predicted = Low
Transcription factor
H0YB79 - ZNF292
Zinc finger protein 292
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 256 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE5
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_H0YB79_H0YB79_HUMAN:170:206_2drp_A_1 | ModCRE | Homology model | TTTTTGTCAGAA | Region 170-206 · 1 3D model | Open · Scan | |
| TFS_tr_H0YB79_H0YB79_HUMAN:174:195_1a1f_A_1 | ModCRE | Homology model | TCGGCCGG | Region 174-195 · 1 3D model | Open · Scan | |
| TFS_tr_H0YB79_H0YB79_HUMAN:174:195_1a1g_A_1 | ModCRE | Homology model | CTGGGGGG | Region 174-195 · 1 3D model | Open · Scan | |
| TFS_tr_H0YB79_H0YB79_HUMAN:174:195_1g2f_C_1 | ModCRE | Homology model | TCGGCAAGGG | Region 174-195 · 1 3D model | Open · Scan | |
| TFS_tr_H0YB79_H0YB79_HUMAN:174:202_1tf3_A_1 | ModCRE | Homology model | TTACTCTAAGGC | Region 174-202 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
256 aa
170-206
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models
5 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 170-2065 models · 5 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_H0YB79_H0YB79_HUMAN:170:206_2drp_A_1 | 2drp | 170-206 | View model · PDB |
| Predicted = Low | TFS_tr_H0YB79_H0YB79_HUMAN:174:195_1a1f_A_1 | 1a1f | 174-195 | View model · PDB |
| Predicted = Low | TFS_tr_H0YB79_H0YB79_HUMAN:174:195_1a1g_A_1 | 1a1g | 174-195 | View model · PDB |
| Predicted = Low | TFS_tr_H0YB79_H0YB79_HUMAN:174:195_1g2f_C_1 | 1g2f | 174-195 | View model · PDB |
| Predicted = Low | TFS_tr_H0YB79_H0YB79_HUMAN:174:202_1tf3_A_1 | 1tf3 | 174-202 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 2 | 1a1g | 170:206 | 174 | 195 | P:A · DNA:B,C | 54.5% / 63.6% | 26 | View · PDB TFS_tr_H0YB79_H0YB79_HUMAN:174:195_1a1g_A_1 |
| 3 | 1a1f | 170:206 | 174 | 195 | P:A · DNA:B,C | 54.5% / 63.6% | 26 | View · PDB TFS_tr_H0YB79_H0YB79_HUMAN:174:195_1a1f_A_1 |
| 5 | 1g2f | 170:206 | 174 | 195 | P:C · DNA:A,B | 45.5% / 63.6% | 24 | View · PDB TFS_tr_H0YB79_H0YB79_HUMAN:174:195_1g2f_C_1 |
| 1 | 1tf3 | 170:206 | 174 | 202 | P:A · DNA:E,F | 37.9% / 62.1% | 31 | View · PDB TFS_tr_H0YB79_H0YB79_HUMAN:174:202_1tf3_A_1 |
| 4 | 2drp | 170:206 | 170 | 206 | P:A · DNA:B,C | 29.7% / 45.9% | 58 | View · PDB TFS_tr_H0YB79_H0YB79_HUMAN:170:206_2drp_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 76-130 | PF26218 | Zinc finger protein 292, C2H2-type zinc finger | No overlap with loaded model regions |
| 175-199 | PF00096 | Zinc finger, C2H2 type | overlaps 170-206 |