ModCRE DB

Transcription factor

H0YJ54 - FOXN3

Forkhead box N3

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 185 aa

58 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)5
MotifPredictionSourceDNA bindingSupportLogoActions
MA1489.1 NN 70+% JASPAR GTAAACAA 98.9% identity Open · Scan
M01227_2.00 NN 70+% CisBP GTAAACAA 88.5% identity Open · Scan
M04827_2.00 NN 70+% CisBP GTAATGTAAACAA 84.2% identity Open · Scan
M03058_2.00 NN 70+% CisBP GTAAACATAAACA 81.8% identity Open · Scan
M01016_2.00 NN 70+% CisBP TGGACGCTAA 74.0% identity Open · Scan
Nearest Neighbor (70% - 40%)53
MotifPredictionSourceDNA bindingSupportLogoActions
M03034_2.00 NN 70-40% CisBP GTAAACA 69.5% identity Open · Scan
M10528_2.00 NN 70-40% CisBP ATAATAATATTTTT 67.5% identity Open · Scan
MA0614.1 NN 70-40% JASPAR GTAAACAA 67.5% identity Open · Scan
M01011_2.00 NN 70-40% CisBP AAGGACGCGA 66.6% identity Open · Scan
M03745_2.00 NN 70-40% CisBP ATGTAAACAAA 64.9% identity Open · Scan
MA0030.1 NN 70-40% JASPAR CAAACGTAAACAAT 64.8% identity Open · Scan
MA1606.1 NN 70-40% JASPAR ATGTAAACAAA 64.8% identity Open · Scan
M01987_2.00 NN 70-40% CisBP GTAAACAAA 64.1% identity Open · Scan
M01004_2.00 NN 70-40% CisBP ACGACGCAAA 63.4% identity Open · Scan
M01015_2.00 NN 70-40% CisBP ACGACGCAAA 63.4% identity Open · Scan
M08557_2.00 NN 70-40% CisBP AAAATTGACGCAAATTCGTT 63.4% identity Open · Scan
M00164_2.00 NN 70-40% CisBP AATGTAAACA 62.1% identity Open · Scan
MA0033.1 NN 70-40% JASPAR TATACATA 62.1% identity Open · Scan
M00791_2.00 NN 70-40% CisBP ATGTAAACAA 59.4% identity Open · Scan
MA0042.1 NN 70-40% JASPAR GGATGTTTGTTT 59.4% identity Open · Scan
MA0613.1 NN 70-40% JASPAR GTAAACAA 59.4% identity Open · Scan
M01974_2.00 NN 70-40% CisBP GTAAACAA 58.3% identity Open · Scan
M03741_2.00 NN 70-40% CisBP TTATGTAAACAAT 58.3% identity Open · Scan
M01982_2.00 NN 70-40% CisBP TATGTAAACA 57.8% identity Open · Scan
M09093_2.00 NN 70-40% CisBP AAATAAACAATA 57.8% identity Open · Scan
M10571_2.00 NN 70-40% CisBP AAAAATAAATATAAGG 57.8% identity Open · Scan
MA0032.1 NN 70-40% JASPAR GGTAAGTA 57.8% identity Open · Scan
MA0040.1 NN 70-40% JASPAR TATTGTTTATT 57.8% identity Open · Scan
MA0846.1 NN 70-40% JASPAR TAAGTAAACAAA 57.8% identity Open · Scan
M01014_2.00 NN 70-40% CisBP GCGCACAAA 57.5% identity Open · Scan
M04848_2.00 NN 70-40% CisBP AACGTCAACAC 56.7% identity Open · Scan
M10570_2.00 NN 70-40% CisBP CTTAAGTAAACAATGG 56.7% identity Open · Scan
MA0031.1 NN 70-40% JASPAR GTAAACAT 56.7% identity Open · Scan
MA1607.1 NN 70-40% JASPAR AATATGTAAACAAA 56.7% identity Open · Scan
M08555_2.00 NN 70-40% CisBP ATGTAAACAAGC 55.8% identity Open · Scan
M00664_2.00 NN 70-40% CisBP ATAAACAA 54.0% identity Open · Scan
M01002_2.00 NN 70-40% CisBP TAAACAA 54.0% identity Open · Scan
M10565_2.00 NN 70-40% CisBP AAACAAACAATC 54.0% identity Open · Scan
MA0041.1 NN 70-40% JASPAR GAATGTTTGTTT 54.0% identity Open · Scan
M03046_2.00 NN 70-40% CisBP GTAAACAA 53.1% identity Open · Scan
MA0851.1 NN 70-40% JASPAR AAAAAGTAAACAAACAC 53.1% identity Open · Scan
MA1103.1 NN 70-40% JASPAR ATGTAAACAAG 52.8% identity Open · Scan
M00665_2.00 NN 70-40% CisBP ATGTAAACAAA 52.7% identity Open · Scan
M01983_2.00 NN 70-40% CisBP TGTTTACATA 52.7% identity Open · Scan
MA0479.1 NN 70-40% JASPAR TCCAATCCACA 52.7% identity Open · Scan
MA0845.1 NN 70-40% JASPAR TATGTAAATAT 52.7% identity Open · Scan
M04835_2.00 NN 70-40% CisBP ACGCGTCGTTACGACGCGT 52.6% identity Open · Scan
M03743_2.00 NN 70-40% CisBP TATGTAAATATTTACATA 51.3% identity Open · Scan
M00663_2.00 NN 70-40% CisBP GTAAAAACAA 51.2% identity Open · Scan
MA1487.1 NN 70-40% JASPAR CCTTAAATAAACAAT 51.2% identity Open · Scan
M03040_2.00 NN 70-40% CisBP GTAAACA 51.1% identity Open · Scan
MA0848.1 NN 70-40% JASPAR GTAAACA 51.1% identity Open · Scan
M00045_2.00 NN 70-40% CisBP GTAAACAA 51.0% identity Open · Scan
MA0852.1 NN 70-40% JASPAR AAAATGTAAACAAACAG 50.9% identity Open · Scan
MA0852.2 NN 70-40% JASPAR AATGTAAACAAGGC 50.9% identity Open · Scan
M00044_2.00 NN 70-40% CisBP GGTAAACAA 50.0% identity Open · Scan
M09669_2.00 NN 70-40% CisBP ATGTAAACACACC 50.0% identity Open · Scan
MA1683.1 NN 70-40% JASPAR ATGTAAACATA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 185 aa
2-44

Region 2-44 0 PWM

Residues
43 aa
Domains
PF00250 · Forkhead domain
3D models
1 active PDB
Templates
5DUI
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 2-441 model
Actions
Predicted = Low DIMER_H0YJ54:2:44_5dui_B_1 5dui 2-44 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
4-48PF00250Forkhead domainoverlaps 2-44