ModCRE DB

Transcription factor

H0YJ94 - FOXN3

Forkhead box N3

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 91 aa

39 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)5
MotifPredictionSourceDNA bindingSupportLogoActions
M01227_2.00 NN 70+% CisBP GTAAACAA 93.2% identity Open · Scan
MA1489.1 NN 70+% JASPAR GTAAACAA 93.2% identity Open · Scan
M04835_2.00 NN 70+% CisBP ACGCGTCGTTACGACGCGT 75.4% identity Open · Scan
M03058_2.00 NN 70+% CisBP GTAAACATAAACA 75.0% identity Open · Scan
M01016_2.00 NN 70+% CisBP TGGACGCTAA 73.3% identity Open · Scan
Nearest Neighbor (70% - 40%)34
MotifPredictionSourceDNA bindingSupportLogoActions
M01011_2.00 NN 70-40% CisBP AAGGACGCGA 66.6% identity Open · Scan
M10528_2.00 NN 70-40% CisBP ATAATAATATTTTT 66.6% identity Open · Scan
MA0614.1 NN 70-40% JASPAR GTAAACAA 66.6% identity Open · Scan
M03745_2.00 NN 70-40% CisBP ATGTAAACAAA 65.0% identity Open · Scan
M04827_2.00 NN 70-40% CisBP GTAATGTAAACAA 64.2% identity Open · Scan
M01987_2.00 NN 70-40% CisBP GTAAACAAA 62.2% identity Open · Scan
MA0030.1 NN 70-40% JASPAR CAAACGTAAACAAT 60.8% identity Open · Scan
MA1606.1 NN 70-40% JASPAR ATGTAAACAAA 60.8% identity Open · Scan
M01008_2.00 NN 70-40% CisBP AGCAAACA 60.7% identity Open · Scan
M01015_2.00 NN 70-40% CisBP ACGACGCAAA 60.4% identity Open · Scan
M08557_2.00 NN 70-40% CisBP AAAATTGACGCAAATTCGTT 60.4% identity Open · Scan
M01004_2.00 NN 70-40% CisBP ACGACGCAAA 58.3% identity Open · Scan
M03034_2.00 NN 70-40% CisBP GTAAACA 56.2% identity Open · Scan
M01993_2.00 NN 70-40% CisBP TAGCAAACAC 54.5% identity Open · Scan
M00164_2.00 NN 70-40% CisBP AATGTAAACA 54.3% identity Open · Scan
M00791_2.00 NN 70-40% CisBP ATGTAAACAA 54.3% identity Open · Scan
M09093_2.00 NN 70-40% CisBP AAATAAACAATA 54.3% identity Open · Scan
MA0033.1 NN 70-40% JASPAR TATACATA 54.3% identity Open · Scan
MA0040.1 NN 70-40% JASPAR TATTGTTTATT 54.3% identity Open · Scan
MA0613.1 NN 70-40% JASPAR GTAAACAA 54.3% identity Open · Scan
M01002_2.00 NN 70-40% CisBP TAAACAA 53.5% identity Open · Scan
M10571_2.00 NN 70-40% CisBP AAAAATAAATATAAGG 53.1% identity Open · Scan
M03046_2.00 NN 70-40% CisBP GTAAACAA 52.8% identity Open · Scan
MA0851.1 NN 70-40% JASPAR AAAAAGTAAACAAACAC 52.8% identity Open · Scan
M03741_2.00 NN 70-40% CisBP TTATGTAAACAAT 52.1% identity Open · Scan
MA0042.1 NN 70-40% JASPAR GGATGTTTGTTT 52.1% identity Open · Scan
M01982_2.00 NN 70-40% CisBP TATGTAAACA 51.0% identity Open · Scan
M10570_2.00 NN 70-40% CisBP CTTAAGTAAACAATGG 51.0% identity Open · Scan
MA0031.1 NN 70-40% JASPAR GTAAACAT 51.0% identity Open · Scan
MA0032.1 NN 70-40% JASPAR GGTAAGTA 51.0% identity Open · Scan
MA0846.1 NN 70-40% JASPAR TAAGTAAACAAA 51.0% identity Open · Scan
MA1103.1 NN 70-40% JASPAR ATGTAAACAAG 50.8% identity Open · Scan
M04848_2.00 NN 70-40% CisBP AACGTCAACAC 50.0% identity Open · Scan
MA1607.1 NN 70-40% JASPAR AATATGTAAACAAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 91 aa
1-29

Region 1-29 0 PWM

Residues
29 aa
Domains
PF00250 · Forkhead domain
3D models
1 active PDB
Templates
2A07
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-291 model
Actions
Predicted = Low DIMER_H0YJ94:1:29_2a07_K_1 2a07 1-29 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
1-51PF00250Forkhead domainoverlaps 1-29