ModCRE DB

Transcription factor

H0YLC5 - POU2F3

POU class 2 homeobox 3

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 160 aa

29 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)11
MotifPredictionSourceDNA bindingSupportLogoActions
M02239_2.00 NN 70+% CisBP TATGCAAATT 84.9% identity Open · Scan
M10829_2.00 NN 70+% CisBP ATATAATTATGCAAATTAAAAGA 79.3% identity Open · Scan
MA0785.1 NN 70+% JASPAR AATATGCAAATT 79.3% identity Open · Scan
M00548_2.00 NN 70+% CisBP GATAATTAA 77.6% identity Open · Scan
M02245_2.00 NN 70+% CisBP ATGCTAATTA 76.9% identity Open · Scan
MA0507.1 NN 70+% JASPAR TTCATTTGCATAT 74.7% identity Open · Scan
MA0627.2 NN 70+% JASPAR AATATGCAAATAA 74.7% identity Open · Scan
M02242_2.00 NN 70+% CisBP GTATAATTAG 73.9% identity Open · Scan
M02243_2.00 NN 70+% CisBP ATAATGCATA 73.9% identity Open · Scan
M00549_2.00 NN 70+% CisBP GATAATGAG 72.2% identity Open · Scan
MA0627.1 NN 70+% JASPAR TTGTATGCAAATTAGA 71.7% identity Open · Scan
Nearest Neighbor (70% - 40%)18
MotifPredictionSourceDNA bindingSupportLogoActions
M06556_2.00 NN 70-40% CisBP TATGCAAATTAG 67.6% identity Open · Scan
M02235_2.00 NN 70-40% CisBP CTAATTAA 62.6% identity Open · Scan
M00553_2.00 NN 70-40% CisBP ATGCATAA 60.8% identity Open · Scan
M02236_2.00 NN 70-40% CisBP CTAATTAAC 60.8% identity Open · Scan
M02240_2.00 NN 70-40% CisBP ATAATGAA 60.8% identity Open · Scan
M05500_2.00 NN 70-40% CisBP TTATGCAAATGAG 60.8% identity Open · Scan
MA0787.1 NN 70-40% JASPAR TTATGCAAATTA 60.8% identity Open · Scan
MA0788.1 NN 70-40% JASPAR ATTATGCTAATTT 60.8% identity Open · Scan
M07542_2.00 NN 70-40% CisBP TGCATA 59.7% identity Open · Scan
M09227_2.00 NN 70-40% CisBP CTCATGAATATTCAAG 59.7% identity Open · Scan
MA0786.1 NN 70-40% JASPAR TTATGCAAATTA 59.7% identity Open · Scan
MA0789.1 NN 70-40% JASPAR TATGCAAAT 59.7% identity Open · Scan
M08032_2.00 NN 70-40% CisBP CCATTGTTATGCAAA 53.3% identity Open · Scan
MA0142.1 NN 70-40% JASPAR CTTTGTTATGCAAAT 53.3% identity Open · Scan
MA1115.1 NN 70-40% JASPAR ATATGCAAATT 52.2% identity Open · Scan
MA0628.1 NN 70-40% JASPAR ATTAATTAAT 52.1% identity Open · Scan
M00545_2.00 NN 70-40% CisBP AGCTCATTAT 50.0% identity Open · Scan
M02244_2.00 NN 70-40% CisBP ATGCATAT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 160 aa
1-91

Region 1-91 0 PWM

Residues
91 aa
Domains
PF00157 · Pou domain - N-terminal to homeobox domain
3D models
1 active PDB
Templates
1HF0
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1-911 model
Actions
Predicted = Low DIMER_H0YLC5:1:91_1hf0_B_1 1hf0 1-91 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
2-48PF00157Pou domain - N-terminal to homeobox domainoverlaps 1-91