Region 232-280 0 PWM
- Residues
- 49 aa
- Domains
- PF03792 · PBC domain PF05920 · Homeobox KN domain
- 3D models
- 1 active PDB
- Templates
- 5ZJR
- Sources
- Structure model
Transcription factor
H0YLF5 - PBX1
Pre-B-cell leukemia transcription factor 1 (Homeobox protein PBX1)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 339 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M05364_2.00 | Known | CisBP | TTGATTGATG | Direct PWM | Open · Scan |
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
339 aa
232-280
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 232-2801 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_H0YLF5:232:280_5zjr_B_1 | 5zjr | 232-280 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 42-232 | PF03792 | PBC domain | overlaps 232-280 |
| 252-282 | PF05920 | Homeobox KN domain | overlaps 232-280 |