Region 49-75 5 PWM
- Residues
- 27 aa
- Domains
- PF19627 · Activity-dependent neuroprotector homeobox protein N-terminal
- 3D models
- 5 active PDBs · 5 summary rows
- Templates
- 3UK3, 4IS1, 8SST
- Sources
- Predicted = Low
Transcription factor
H0YM09 - ADNP2
ADNP homeobox 2
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 229 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)1
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M10370_2.00 | NN 70-40% | CisBP | TTTTTTATGC | 52.1% identity | Open · Scan |
ModCRE5
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_H0YM09_H0YM09_HUMAN:49:73_8sst_A_1 | ModCRE | Homology model | AACTCACGTGGGG | Region 49-73 · 1 3D model | Open · Scan | |
| TFS_tr_H0YM09_H0YM09_HUMAN:49:74_3uk3_C_1 | ModCRE | Homology model | CCCAGCACATG | Region 49-74 · 1 3D model | Open · Scan | |
| TFS_tr_H0YM09_H0YM09_HUMAN:49:74_4is1_C_1 | ModCRE | Homology model | CCCAGCGCTTG | Region 49-74 · 1 3D model | Open · Scan | |
| TFS_tr_H0YM09_H0YM09_HUMAN:49:75_3uk3_D_1 | ModCRE | Homology model | CCTTTCCCCG | Region 49-75 · 1 3D model | Open · Scan | |
| TFS_tr_H0YM09_H0YM09_HUMAN:49:75_4is1_D_1 | ModCRE | Homology model | CCGGTCCTGG | Region 49-75 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
229 aa
49-75
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models
5 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 49-755 models · 5 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_H0YM09_H0YM09_HUMAN:49:73_8sst_A_1 | 8sst | 49-73 | View model · PDB |
| Predicted = Low | TFS_tr_H0YM09_H0YM09_HUMAN:49:74_3uk3_C_1 | 3uk3 | 49-74 | View model · PDB |
| Predicted = Low | TFS_tr_H0YM09_H0YM09_HUMAN:49:74_4is1_C_1 | 4is1 | 49-74 | View model · PDB |
| Predicted = Low | TFS_tr_H0YM09_H0YM09_HUMAN:49:75_3uk3_D_1 | 3uk3 | 49-75 | View model · PDB |
| Predicted = Low | TFS_tr_H0YM09_H0YM09_HUMAN:49:75_4is1_D_1 | 4is1 | 49-75 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 3 | 4is1 | 49:75 | 49 | 74 | P:C · DNA:A,B | 46.2% / 61.5% | 50 | View · PDB TFS_tr_H0YM09_H0YM09_HUMAN:49:74_4is1_C_1 |
| 4 | 3uk3 | 49:75 | 49 | 74 | P:C · DNA:A,B | 46.2% / 61.5% | 50 | View · PDB TFS_tr_H0YM09_H0YM09_HUMAN:49:74_3uk3_C_1 |
| 1 | 4is1 | 49:75 | 49 | 75 | P:D · DNA:A,B | 44.4% / 63.0% | 50 | View · PDB TFS_tr_H0YM09_H0YM09_HUMAN:49:75_4is1_D_1 |
| 2 | 3uk3 | 49:75 | 49 | 75 | P:D · DNA:A,B | 44.4% / 63.0% | 50 | View · PDB TFS_tr_H0YM09_H0YM09_HUMAN:49:75_3uk3_D_1 |
| 5 | 8sst | 49:75 | 49 | 73 | P:A · DNA:B,C | 28.0% / 64.0% | 12 | View · PDB TFS_tr_H0YM09_H0YM09_HUMAN:49:73_8sst_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 13-107 | PF19627 | Activity-dependent neuroprotector homeobox protein N-terminal | overlaps 49-75 |