ModCRE DB

Transcription factor

H0YND9 - ZEB1

Zinc finger E-box binding homeobox 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 288 aa

25 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)4
MotifPredictionSourceDNA bindingSupportLogoActions
MA0103.2 NN 70+% JASPAR CCTCACCTG 79.5% identity Open · Scan
M05844_2.00 NN 70+% CisBP TCACCTGT 78.1% identity Open · Scan
M07842_2.00 NN 70+% CisBP CTCACCTG 73.7% identity Open · Scan
MA0103.1 NN 70+% JASPAR CACCTG 72.1% identity Open · Scan
Nearest Neighbor (70% - 40%)21
MotifPredictionSourceDNA bindingSupportLogoActions
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 61.5% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 61.5% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 61.5% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 61.5% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 59.5% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 57.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 57.5% identity Open · Scan
M04651_2.00 NN 70-40% CisBP TTCACTATTATAGTGAA 56.1% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 55.3% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 55.3% identity Open · Scan
M00019_2.00 NN 70-40% CisBP ACCCCTAATT 54.0% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 53.6% identity Open · Scan
MA0735.1 NN 70-40% JASPAR AGACCCCCCACGAAGC 52.2% identity Open · Scan
MA0737.1 NN 70-40% JASPAR GACCCCCCACGAAG 52.0% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 51.1% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 51.0% identity Open · Scan
M00129_2.00 NN 70-40% CisBP AGACCCCCCAC 50.0% identity Open · Scan
M01538_2.00 NN 70-40% CisBP GCCCCTGA 50.0% identity Open · Scan
M06112_2.00 NN 70-40% CisBP CTACTTTCACCGGGG 50.0% identity Open · Scan
M07625_2.00 NN 70-40% CisBP TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 50.0% identity Open · Scan
MA0736.1 NN 70-40% JASPAR GACCCCCCGCGAAG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 288 aa
154-216

Region 154-216 0 PWM

Residues
63 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5K5H
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 154-2161 model
Actions
Predicted = Low TFS_H0YND9:154:216_5k5h_A_1 5k5h 154-216 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
96-148PF05605Drought induced 19 protein (Di19), zinc-bindingNo overlap with loaded model regions
166-188PF00096Zinc finger, C2H2 typeoverlaps 154-216
194-214PF00096Zinc finger, C2H2 typeoverlaps 154-216