Region 15-115 0 PWM
- Residues
- 101 aa
- Domains
- PF00605 · Interferon regulatory factor transcription factor
- 3D models
- 1 active PDB
- Templates
- 1T2K
- Sources
- Structure model
Transcription factor
H0YNP4 - IRF9
Interferon regulatory factor 9 (IFN-alpha-responsive transcription factor subunit) (ISGF3 p48 subunit) (Interferon-stimulated gene factor 3 gamma) (Transcriptional regulator ISGF3 subunit gamma)
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 402 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)1
Nearest Neighbor (70% - 40%)3
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| M02258_2.00 | NN 70-40% | CisBP | AACGAAACT | 68.7% identity | Open · Scan | |
| M09240_2.00 | NN 70-40% | CisBP | GAAAGCGAAACT | 68.5% identity | Open · Scan | |
| M05543_2.00 | NN 70-40% | CisBP | TCGAAACCGAAACTA | 60.7% identity | Open · Scan |
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
402 aa
15-115
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 15-1151 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | DIMER_H0YNP4:15:115_1t2k_A_1 | 1t2k | 15-115 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 11-114 | PF00605 | Interferon regulatory factor transcription factor | overlaps 15-115 |
| 227-390 | PF10401 | Interferon-regulatory factor 3 | No overlap with loaded model regions |