ModCRE DB

Transcription factor

H3BRD6 - ZNF821

Zinc finger protein 821

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 250 aa

6 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_H3BRD6_H3BRD6_HUMAN:106:145_1llm_C_1 ModCRE Homology model AACGCGCGCAAA Region 106-145 · 1 3D model Open · Scan
TFS_tr_H3BRD6_H3BRD6_HUMAN:66:152_2i13_A_1 ModCRE Homology model CTTACTACTCCCCATTAA Region 66-152 · 1 3D model Open · Scan
TFS_tr_H3BRD6_H3BRD6_HUMAN:85:150_7ysf_A_1 ModCRE Homology model GTCGGGGAGTGTCT Region 85-150 · 1 3D model Open · Scan
TFS_tr_H3BRD6_H3BRD6_HUMAN:92:150_5kkq_A_1 ModCRE Homology model AATTACCTGGTTGAGG Region 92-150 · 1 3D model Open · Scan
TFS_tr_H3BRD6_H3BRD6_HUMAN:92:150_5t00_A_1 ModCRE Homology model CGGGTACTAGTTGAGG Region 92-150 · 1 3D model Open · Scan
TFS_tr_H3BRD6_H3BRD6_HUMAN:92:150_5yef_A_1 ModCRE Homology model AGGCTTACAGGTTATTT Region 92-150 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 250 aa
66-152

Region 66-152 6 PWM

Residues
87 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5KKQ, 5T00, 5YEF, 7YSF
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 66-1526 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_H3BRD6_H3BRD6_HUMAN:106:145_1llm_C_1 1llm 106-145 View model · PDB
Predicted = Low TFS_tr_H3BRD6_H3BRD6_HUMAN:66:152_2i13_A_1 2i13 66-152 View model · PDB
Predicted = Low TFS_tr_H3BRD6_H3BRD6_HUMAN:85:150_7ysf_A_1 7ysf 85-150 View model · PDB
Predicted = Low TFS_tr_H3BRD6_H3BRD6_HUMAN:92:150_5kkq_A_1 5kkq 92-150 View model · PDB
Predicted = Low TFS_tr_H3BRD6_H3BRD6_HUMAN:92:150_5t00_A_1 5t00 92-150 View model · PDB
Predicted = Low TFS_tr_H3BRD6_H3BRD6_HUMAN:92:150_5yef_A_1 5yef 92-150 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 66:166 106,106 145,145 P:C,D · DNA:A,B 30.0% / 50.0% 45,47 View · PDB DIMER_tr_H3BRD6_H3BRD6_HUMAN:106:145_1llm_C_1
4 7ysf 66:166 85 150 P:A · DNA:B,C 28.8% / 45.5% 58 View · PDB TFS_tr_H3BRD6_H3BRD6_HUMAN:85:150_7ysf_A_1
2 5t00 66:166 92 150 P:A · DNA:B,C 27.1% / 47.5% 41 View · PDB TFS_tr_H3BRD6_H3BRD6_HUMAN:92:150_5t00_A_1
3 5kkq 66:166 92 150 P:A · DNA:B,C 27.1% / 47.5% 40 View · PDB TFS_tr_H3BRD6_H3BRD6_HUMAN:92:150_5kkq_A_1
5 5yef 66:166 92 150 P:A · DNA:C,D 27.1% / 47.5% 34 View · PDB TFS_tr_H3BRD6_H3BRD6_HUMAN:92:150_5yef_A_1
1 2i13 66:166 66 152 P:A · DNA:C,D 26.4% / 40.2% 57 View · PDB TFS_tr_H3BRD6_H3BRD6_HUMAN:66:152_2i13_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
108-130PF00096Zinc finger, C2H2 typeoverlaps 66-152