Region 70-177 5 PWM
- Residues
- 108 aa
- Domains
- PF01429 · Methyl-CpG binding domain
- 3D models
- 5 active PDBs · 5 summary rows
- Templates
- 7FHJ, 7MWH, 7MWL
- Sources
- Predicted = Low
Transcription factor
H7C092 - BAZ2B
Bromodomain adjacent to zinc finger domain 2B
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 194 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE5
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_H7C092_H7C092_HUMAN:70:177_7mwl_A_1 | ModCRE | Homology model | GGGCCCCA | Region 70-177 · 1 3D model | Open · Scan | |
| TFS_tr_H7C092_H7C092_HUMAN:71:175_7fhj_A_1 | ModCRE | Homology model | TTATTAAC | Region 71-175 · 1 3D model | Open · Scan | |
| TFS_tr_H7C092_H7C092_HUMAN:71:175_7fhj_B_1 | ModCRE | Homology model | AATTTG | Region 71-175 · 1 3D model | Open · Scan | |
| TFS_tr_H7C092_H7C092_HUMAN:71:175_7mwh_A_1 | ModCRE | Homology model | TAAGTACA | Region 71-175 · 1 3D model | Open · Scan | |
| TFS_tr_H7C092_H7C092_HUMAN:71:175_7mwh_B_1 | ModCRE | Homology model | AATTTT | Region 71-175 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
194 aa
70-177
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models
5 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 70-1775 models · 5 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_H7C092_H7C092_HUMAN:70:177_7mwl_A_1 | 7mwl | 70-177 | View model · PDB |
| Predicted = Low | TFS_tr_H7C092_H7C092_HUMAN:71:175_7fhj_A_1 | 7fhj | 71-175 | View model · PDB |
| Predicted = Low | TFS_tr_H7C092_H7C092_HUMAN:71:175_7fhj_B_1 | 7fhj | 71-175 | View model · PDB |
| Predicted = Low | TFS_tr_H7C092_H7C092_HUMAN:71:175_7mwh_A_1 | 7mwh | 71-175 | View model · PDB |
| Predicted = Low | TFS_tr_H7C092_H7C092_HUMAN:71:175_7mwh_B_1 | 7mwh | 71-175 | View model · PDB |
Model-summary evidence imported for this region.
| Rank | Template | Domain | N-tails | C-tails | Chains | Identity / similarity | Coverage | Model file |
|---|---|---|---|---|---|---|---|---|
| 1 | 7mwl | 70:177 | 70 | 177 | P:A · DNA:E,F | 51.9% / 74.1% | 100 | View · PDB TFS_tr_H7C092_H7C092_HUMAN:70:177_7mwl_A_1 |
| 2 | 7mwh | 70:177 | 71 | 175 | P:B · DNA:C,D | 51.4% / 74.3% | 99 | View · PDB TFS_tr_H7C092_H7C092_HUMAN:71:175_7mwh_B_1 |
| 3 | 7mwh | 70:177 | 71 | 175 | P:A · DNA:C,D | 51.4% / 74.3% | 99 | View · PDB TFS_tr_H7C092_H7C092_HUMAN:71:175_7mwh_A_1 |
| 4 | 7fhj | 70:177 | 71 | 175 | P:B · DNA:C,D | 51.4% / 74.3% | 99 | View · PDB TFS_tr_H7C092_H7C092_HUMAN:71:175_7fhj_B_1 |
| 5 | 7fhj | 70:177 | 71 | 175 | P:A · DNA:C,D | 51.4% / 74.3% | 99 | View · PDB TFS_tr_H7C092_H7C092_HUMAN:71:175_7fhj_A_1 |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 74-146 | PF01429 | Methyl-CpG binding domain | overlaps 70-177 |