ModCRE DB

Transcription factor

I3L1J3 - ZSCAN10

Zinc finger and SCAN domain-containing protein 10 (Zinc finger protein 206)

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 780 aa

58 Generated PWM 16 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)44
MotifPredictionSourceDNA bindingSupportLogoActions
M00943_2.00 NN 70-40% CisBP CCCGCTGC 61.1% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 61.1% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 61.1% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 60.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 58.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 58.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 58.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 57.6% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 56.4% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 56.4% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 55.1% identity Open · Scan
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 53.8% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 53.8% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 53.2% identity Open · Scan
M08320_2.00 NN 70-40% CisBP TTCCCTGCC 53.1% identity Open · Scan
M00765_2.00 NN 70-40% CisBP CCCGCCCCC 53.0% identity Open · Scan
MA0079.1 NN 70-40% JASPAR GGGGCGGGGT 53.0% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 52.8% identity Open · Scan
MA0073.1 NN 70-40% JASPAR CCCCAAACCACCCCCCCCCA 52.7% identity Open · Scan
M05859_2.00 NN 70-40% CisBP GGCCACGCCCACT 52.6% identity Open · Scan
MA0685.1 NN 70-40% JASPAR TAAGCCACGCCCCCTTT 52.6% identity Open · Scan
MA0746.1 NN 70-40% JASPAR GCCACGCCCCC 52.6% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 52.6% identity Open · Scan
M01181_2.00 NN 70-40% CisBP GCGCATCCCC 52.5% identity Open · Scan
M01440_2.00 NN 70-40% CisBP TACGCCAC 52.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 51.7% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 51.7% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 51.7% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 51.7% identity Open · Scan
M10303_2.00 NN 70-40% CisBP TACTGGGAATACC 51.5% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 51.3% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 51.3% identity Open · Scan
MA0741.1 NN 70-40% JASPAR GCCACGCCCCC 51.2% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 50.9% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 50.9% identity Open · Scan
MA0753.1 NN 70-40% JASPAR CCCCCCCCAC 50.6% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 50.4% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 50.4% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 50.3% identity Open · Scan
M01447_2.00 NN 70-40% CisBP TACCCCTGA 50.0% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 50.0% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 50.0% identity Open · Scan
M10203_2.00 NN 70-40% CisBP CCCCAAACCACCCC 50.0% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 50.0% identity Open · Scan
ModCRE14
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_I3L1J3_I3L1J3_HUMAN:344:454_2i13_A_1 ModCRE Homology model TCTGGCAGTAGCTAGTGGTC Region 344-454 · 1 3D model Open · Scan
TFS_tr_I3L1J3_I3L1J3_HUMAN:344:454_5ei9_E_1 ModCRE Homology model TGGGCGGGGGGGGGGCC Region 344-454 · 1 3D model Open · Scan
TFS_tr_I3L1J3_I3L1J3_HUMAN:344:508_5v3j_E_1 ModCRE Homology model ACGGGGCCGGGGGGGCTC Region 344-508 · 1 3D model Open · Scan
TFS_tr_I3L1J3_I3L1J3_HUMAN:344:508_5v3m_C_1 ModCRE Homology model CCCCCGACGAGGGCGCTCG Region 344-508 · 1 3D model Open · Scan
TFS_tr_I3L1J3_I3L1J3_HUMAN:344:508_5wjq_D_1 ModCRE Homology model CCCCCGACGACGGCACCCG Region 344-508 · 1 3D model Open · Scan
TFS_tr_I3L1J3_I3L1J3_HUMAN:477:513_1ubd_C_1 ModCRE Homology model GCCCCCCGGCCCAG Region 477-513 · 1 3D model Open · Scan
TFS_tr_I3L1J3_I3L1J3_HUMAN:478:500_5yj3_C_1 ModCRE Homology model CCCAA Region 478-500 · 1 3D model Open · Scan
TFS_tr_I3L1J3_I3L1J3_HUMAN:478:500_5yj3_D_1 ModCRE Homology model CACAAGGGGGGA Region 478-500 · 1 3D model Open · Scan
TFS_tr_I3L1J3_I3L1J3_HUMAN:478:516_5v3j_E_1 ModCRE Homology model ACCAACCTT Region 478-516 · 1 3D model Open · Scan
TFS_tr_I3L1J3_I3L1J3_HUMAN:478:516_5v3m_C_1 ModCRE Homology model AGGGGCCGTG Region 478-516 · 1 3D model Open · Scan
TFS_tr_I3L1J3_I3L1J3_HUMAN:520:774_5v3j_E_1 ModCRE Homology model GCCGAGGGGGGGGGGTACCCCTCGGA Region 520-774 · 1 3D model Open · Scan
TFS_tr_I3L1J3_I3L1J3_HUMAN:520:774_5v3m_C_1 ModCRE Homology model CCGCGGGGGGGGGGCCGGGCGGGGGG Region 520-774 · 1 3D model Open · Scan
TFS_tr_I3L1J3_I3L1J3_HUMAN:520:780_5wjq_D_1 ModCRE Homology model TTCGGGGGGGGGGGGGCGCCGGGCGGG Region 520-780 · 1 3D model Open · Scan
TFS_tr_I3L1J3_I3L1J3_HUMAN:559:712_2i13_A_1 ModCRE Homology model ATATACAGCATACTTTCTCAT Region 559-712 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 780 aa
344-516
520-780

Region 344-516 10 PWM

Residues
173 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
10 active PDBs
Templates
1UBD, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ, 5YJ3
Sources
Predicted = Low
Scan this region Show models

Region 520-780 4 PWM

Residues
261 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
16 active PDB models 6 summary rows
Region 344-51610 models
Actions
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:344:454_2i13_A_1 2i13 344-454 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:344:454_5ei9_E_1 5ei9 344-454 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:344:508_5v3j_E_1 5v3j 344-508 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:344:508_5v3m_C_1 5v3m 344-508 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:344:508_5wjq_D_1 5wjq 344-508 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:477:513_1ubd_C_1 1ubd 477-513 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:478:500_5yj3_C_1 5yj3 478-500 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:478:500_5yj3_D_1 5yj3 478-500 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:478:516_5v3j_E_1 5v3j 478-516 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:478:516_5v3m_C_1 5v3m 478-516 View model · PDB
Region 520-7806 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_I3L1J3_I3L1J3_HUMAN:632:681_1llm_D_1 1llm 632-681 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:520:774_5v3j_E_1 5v3j 520-774 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:520:774_5v3m_C_1 5v3m 520-774 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:520:780_5wjq_D_1 5wjq 520-780 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:522:780_7w1m_H_1 7w1m 522-780 View model · PDB
Predicted = Low TFS_tr_I3L1J3_I3L1J3_HUMAN:559:712_2i13_A_1 2i13 559-712 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 513:780 632,632 681,681 P:C,D · DNA:A,B 54.0% / 60.0% 57,58 View · PDB DIMER_tr_I3L1J3_I3L1J3_HUMAN:632:681_1llm_D_1
4 2i13 513:780 559 712 P:A · DNA:C,D 53.9% / 63.6% 100 View · PDB TFS_tr_I3L1J3_I3L1J3_HUMAN:559:712_2i13_A_1
1 5v3m 513:780 520 774 P:C · DNA:A,B 47.5% / 61.6% 89 View · PDB TFS_tr_I3L1J3_I3L1J3_HUMAN:520:774_5v3m_C_1
2 5v3j 513:780 520 774 P:E · DNA:A,B 47.5% / 61.6% 89 View · PDB TFS_tr_I3L1J3_I3L1J3_HUMAN:520:774_5v3j_E_1
3 5wjq 513:780 520 780 P:D · DNA:A,B 47.1% / 60.9% 90 View · PDB TFS_tr_I3L1J3_I3L1J3_HUMAN:520:780_5wjq_D_1
5 7w1m 513:780 522 780 P:H · DNA:F,G 33.2% / 44.7% 79 View · PDB TFS_tr_I3L1J3_I3L1J3_HUMAN:522:780_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
40-127PF02023SCAN domainNo overlap with loaded model regions
347-370PF00096Zinc finger, C2H2 typeoverlaps 344-516
404-426PF00096Zinc finger, C2H2 typeoverlaps 344-516
478-498PF00096Zinc finger, C2H2 typeoverlaps 344-516
522-544PF00096Zinc finger, C2H2 typeoverlaps 520-780
550-572PF00096Zinc finger, C2H2 typeoverlaps 520-780
578-600PF00096Zinc finger, C2H2 typeoverlaps 520-780
606-628PF00096Zinc finger, C2H2 typeoverlaps 520-780
635-656PF00096Zinc finger, C2H2 typeoverlaps 520-780
662-684PF00096Zinc finger, C2H2 typeoverlaps 520-780
690-712PF00096Zinc finger, C2H2 typeoverlaps 520-780
725-746PF00096Zinc finger, C2H2 typeoverlaps 520-780
752-774PF00096Zinc finger, C2H2 typeoverlaps 520-780