ModCRE DB

Transcription factor

I3L216 - ZNF213

Zinc finger protein 213

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 270 aa

118 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)112
MotifPredictionSourceDNA bindingSupportLogoActions
M00948_2.00 NN 70-40% CisBP GCAGCACC 69.0% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 69.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 67.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 65.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 65.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 64.7% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 64.7% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 63.5% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 62.9% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 60.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 59.5% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 59.4% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 59.4% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 59.1% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 58.0% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 57.9% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 57.2% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 57.2% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 56.8% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 56.8% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 56.6% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 56.6% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 56.5% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 56.5% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 56.5% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 56.5% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 56.5% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 56.4% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 56.3% identity Open · Scan
MA1652.1 NN 70-40% JASPAR GGAGGAGGTGAGAA 56.3% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 56.1% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 55.7% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 55.7% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 55.7% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 55.7% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 55.3% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 55.2% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 55.0% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 55.0% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 55.0% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 55.0% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 55.0% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 55.0% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 54.8% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 54.7% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 54.3% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 54.3% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 54.2% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 54.0% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 54.0% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 53.9% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 53.8% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 53.6% identity Open · Scan
M08274_2.00 NN 70-40% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 53.6% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 53.6% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.6% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 53.5% identity Open · Scan
M07703_2.00 NN 70-40% CisBP CCGACGG 53.3% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 53.2% identity Open · Scan
M08247_2.00 NN 70-40% CisBP AAAAATAACAAACGG 53.2% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 53.2% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 53.1% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 53.1% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 53.0% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 52.8% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 52.8% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 52.8% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 52.7% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 52.7% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.7% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 52.5% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 52.5% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 52.5% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 52.4% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 52.3% identity Open · Scan
M00785_2.00 NN 70-40% CisBP TTCACTTCCT 52.1% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 52.1% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 52.1% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 52.1% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 52.1% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 52.1% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 52.1% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 52.0% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 51.8% identity Open · Scan
M06135_2.00 NN 70-40% CisBP CAGCCACGCCCACCT 51.8% identity Open · Scan
M06179_2.00 NN 70-40% CisBP TAAGCCTATAGA 51.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.8% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 51.7% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 51.7% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 51.7% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 51.7% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 51.7% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 51.7% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 51.4% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 51.4% identity Open · Scan
M07720_2.00 NN 70-40% CisBP TGTGTGTGTGGGCATGTGTGTGTGCGAGT 51.4% identity Open · Scan
M07746_2.00 NN 70-40% CisBP CAGCTGGCGCCCAACATGGGTCCC 51.4% identity Open · Scan
M08358_2.00 NN 70-40% CisBP CCCTCCCCCTCC 51.4% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 51.1% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 51.0% identity Open · Scan
M07684_2.00 NN 70-40% CisBP CCTGTTCTTGACTTT 51.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.0% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 50.9% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 50.7% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 50.7% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 50.6% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 50.6% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 50.3% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.0% identity Open · Scan
M01883_2.00 NN 70-40% CisBP TGCCCCTGA 50.0% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_I3L216_I3L216_HUMAN:182:233_1llm_D_1 ModCRE Homology model TACGCGCCCGGC Region 182-233 · 1 3D model Open · Scan
TFS_tr_I3L216_I3L216_HUMAN:125:235_5ei9_E_1 ModCRE Homology model GCCCCGGGGGGCGGGCC Region 125-235 · 1 3D model Open · Scan
TFS_tr_I3L216_I3L216_HUMAN:125:262_5v3j_E_1 ModCRE Homology model CGGGCGCGGGGGGCCGGGGGCCT Region 125-262 · 1 3D model Open · Scan
TFS_tr_I3L216_I3L216_HUMAN:125:262_5v3m_C_1 ModCRE Homology model TTGTCGGAGGGGGGGCGGAAGC Region 125-262 · 1 3D model Open · Scan
TFS_tr_I3L216_I3L216_HUMAN:125:262_5wjq_D_1 ModCRE Homology model GGGGGAAGGGGGGGGCGGGG Region 125-262 · 1 3D model Open · Scan
TFS_tr_I3L216_I3L216_HUMAN:126:262_2i13_A_1 ModCRE Homology model GTTACTCTGTAGCTAGCGGAC Region 126-262 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 270 aa
125-262

Region 125-262 6 PWM

Residues
138 aa
Domains
PF13465 · Zinc-finger double domain PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5EI9, 5V3J, 5V3M, 5WJQ
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 125-2626 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_I3L216_I3L216_HUMAN:182:233_1llm_D_1 1llm 182-233 View model · PDB
Predicted = Low TFS_tr_I3L216_I3L216_HUMAN:125:235_5ei9_E_1 5ei9 125-235 View model · PDB
Predicted = Low TFS_tr_I3L216_I3L216_HUMAN:125:262_5v3j_E_1 5v3j 125-262 View model · PDB
Predicted = Low TFS_tr_I3L216_I3L216_HUMAN:125:262_5v3m_C_1 5v3m 125-262 View model · PDB
Predicted = Low TFS_tr_I3L216_I3L216_HUMAN:125:262_5wjq_D_1 5wjq 125-262 View model · PDB
Predicted = Low TFS_tr_I3L216_I3L216_HUMAN:126:262_2i13_A_1 2i13 126-262 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 2i13 116:264 126 262 P:A · DNA:C,D 59.9% / 70.8% 90 View · PDB TFS_tr_I3L216_I3L216_HUMAN:126:262_2i13_A_1
5 5ei9 116:264 125 235 P:E · DNA:A,B 56.8% / 70.3% 100 View · PDB TFS_tr_I3L216_I3L216_HUMAN:125:235_5ei9_E_1
2 5wjq 116:264 125 262 P:D · DNA:A,B 52.2% / 72.5% 48 View · PDB TFS_tr_I3L216_I3L216_HUMAN:125:262_5wjq_D_1
3 5v3m 116:264 125 262 P:C · DNA:A,B 52.2% / 67.4% 49 View · PDB TFS_tr_I3L216_I3L216_HUMAN:125:262_5v3m_C_1
4 5v3j 116:264 125 262 P:E · DNA:A,B 52.2% / 67.4% 49 View · PDB TFS_tr_I3L216_I3L216_HUMAN:125:262_5v3j_E_1
1 1llm 116:264 182,182 233,233 P:C,D · DNA:A,B 48.1% / 59.6% 59,61 View · PDB DIMER_tr_I3L216_I3L216_HUMAN:182:233_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
143-166PF13465Zinc-finger double domainoverlaps 125-262
184-206PF00096Zinc finger, C2H2 typeoverlaps 125-262
214-234PF00096Zinc finger, C2H2 typeoverlaps 125-262
242-262PF00096Zinc finger, C2H2 typeoverlaps 125-262