ModCRE DB

Transcription factor

J3KNN9 - WT1

WT1 transcription factor

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 502 aa

65 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M00249_2.00 NN 70+% CisBP ACTCCCCCGCA 98.6% identity Open · Scan
M08968_2.00 NN 70+% CisBP CCCCCCCTCCTCCCCCGCCC 96.3% identity Open · Scan
MA1627.1 NN 70+% JASPAR CCCCTCCCCCACAC 92.0% identity Open · Scan
Nearest Neighbor (70% - 40%)62
MotifPredictionSourceDNA bindingSupportLogoActions
M06072_2.00 NN 70-40% CisBP CCACGCCCACGCAC 66.2% identity Open · Scan
M09515_2.00 NN 70-40% CisBP CCCGCCCACGCA 64.7% identity Open · Scan
MA0472.1 NN 70-40% JASPAR CCCCCGCCCACGCAC 64.7% identity Open · Scan
MA0472.2 NN 70-40% JASPAR ACGCCCACGCA 64.7% identity Open · Scan
MA0732.1 NN 70-40% JASPAR CTACGCCCACGCACT 63.9% identity Open · Scan
MA0162.1 NN 70-40% JASPAR TGCGTGGGCGG 63.0% identity Open · Scan
MA0162.2 NN 70-40% JASPAR CCCCCGCCCCCGCC 63.0% identity Open · Scan
M06169_2.00 NN 70-40% CisBP GCCACGCCCAAC 60.4% identity Open · Scan
MA0733.1 NN 70-40% JASPAR TTACGCCCACGCATTT 60.0% identity Open · Scan
M00224_2.00 NN 70-40% CisBP CCCGCCCC 59.2% identity Open · Scan
M04463_2.00 NN 70-40% CisBP CACCACGCCCA 59.2% identity Open · Scan
MA0039.1 NN 70-40% JASPAR TAAAGGAAGG 59.2% identity Open · Scan
MA0039.3 NN 70-40% JASPAR CCACACCCTGC 59.2% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 58.3% identity Open · Scan
M08525_2.00 NN 70-40% CisBP CCCCGCA 58.1% identity Open · Scan
MA1513.1 NN 70-40% JASPAR GCCCCGCCCCC 58.0% identity Open · Scan
MA1515.1 NN 70-40% JASPAR CACCACGCCCA 58.0% identity Open · Scan
M04430_2.00 NN 70-40% CisBP GACCACGCCCA 57.8% identity Open · Scan
MA0742.1 NN 70-40% JASPAR GACCACGCCCTTATT 57.8% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 56.9% identity Open · Scan
M01529_2.00 NN 70-40% CisBP CCCCGCATT 56.8% identity Open · Scan
M00632_2.00 NN 70-40% CisBP ACACGCCCCT 56.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 56.3% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 56.3% identity Open · Scan
M00777_2.00 NN 70-40% CisBP ACCGTTAT 56.1% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 55.8% identity Open · Scan
MA1517.1 NN 70-40% JASPAR GGCCACGCCCA 55.4% identity Open · Scan
M01192_2.00 NN 70-40% CisBP CCCCCTGA 55.3% identity Open · Scan
M00617_2.00 NN 70-40% CisBP CCACGCCCA 54.8% identity Open · Scan
M04555_2.00 NN 70-40% CisBP GCCACGCCCCCGCCACGCCCAC 54.5% identity Open · Scan
MA1512.1 NN 70-40% JASPAR GCCACGCCCAC 54.5% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 54.2% identity Open · Scan
MA0747.1 NN 70-40% JASPAR GCCACGCCCACT 54.2% identity Open · Scan
MA1564.1 NN 70-40% JASPAR GCCACGCCCCCC 54.2% identity Open · Scan
M01035_2.00 NN 70-40% CisBP CCCCCTTAAT 54.1% identity Open · Scan
MA1516.1 NN 70-40% JASPAR GACCACGCCCA 53.9% identity Open · Scan
M01042_2.00 NN 70-40% CisBP TGGGACCTGA 53.8% identity Open · Scan
M01432_2.00 NN 70-40% CisBP GACGCCAC 52.9% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 52.8% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 52.8% identity Open · Scan
M01180_2.00 NN 70-40% CisBP ACCCCTGG 52.1% identity Open · Scan
MA0740.1 NN 70-40% JASPAR GGCCACGCCCCCTT 52.1% identity Open · Scan
M01441_2.00 NN 70-40% CisBP CCCCTGAATT 52.0% identity Open · Scan
M01531_2.00 NN 70-40% CisBP CCCCCCCTAAAT 52.0% identity Open · Scan
M09008_2.00 NN 70-40% CisBP CCCGGCCCCACCCT 51.9% identity Open · Scan
MA0493.1 NN 70-40% JASPAR GGCCACACCCA 51.9% identity Open · Scan
M08246_2.00 NN 70-40% CisBP GCCCCACCCA 51.8% identity Open · Scan
MA1511.1 NN 70-40% JASPAR GCCACACCCCC 51.8% identity Open · Scan
M01442_2.00 NN 70-40% CisBP ACCCCACATT 51.7% identity Open · Scan
M01470_2.00 NN 70-40% CisBP CCCCCCGC 51.7% identity Open · Scan
M08528_2.00 NN 70-40% CisBP ACCCCACTTTTTTG 51.7% identity Open · Scan
MA1580.1 NN 70-40% JASPAR TGTACAGTAT 51.5% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 51.4% identity Open · Scan
M06466_2.00 NN 70-40% CisBP TCCGCCCCCT 51.1% identity Open · Scan
MA0750.1 NN 70-40% JASPAR GGCGACCACCGA 51.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 50.5% identity Open · Scan
M00647_2.00 NN 70-40% CisBP CCCCCCC 50.0% identity Open · Scan
M01537_2.00 NN 70-40% CisBP TACCCCGCAC 50.0% identity Open · Scan
M02731_2.00 NN 70-40% CisBP CACTTTCACTTT 50.0% identity Open · Scan
M02903_2.00 NN 70-40% CisBP ATGCCACGCCCCTTTTTG 50.0% identity Open · Scan
MA0508.1 NN 70-40% JASPAR AGAAAGTGAAAGTGA 50.0% identity Open · Scan
MA0516.1 NN 70-40% JASPAR GCCCCGCCCCCTCCC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 502 aa
406-493

Region 406-493 0 PWM

Residues
88 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1P47
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 406-4931 model
Actions
Predicted = Low TFS_J3KNN9:406:493_1p47_A_1 1p47 406-493 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
74-377PF02165Wilm's tumour proteinNo overlap with loaded model regions
409-433PF00096Zinc finger, C2H2 typeoverlaps 406-493
439-461PF00096Zinc finger, C2H2 typeoverlaps 406-493
467-491PF00096Zinc finger, C2H2 typeoverlaps 406-493