ModCRE DB

Transcription factor

J3KNV1 - ZNF292

Zinc finger protein 292

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 2718 aa

6 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_J3KNV1_J3KNV1_HUMAN:719:747_1llm_C_1 ModCRE Homology model AAAGCGCGGAAA Region 719-747 · 1 3D model Open · Scan
TFS_tr_J3KNV1_J3KNV1_HUMAN:715:827_5egb_A_1 ModCRE Homology model ACGGGCCGCGCCGGGGGG Region 715-827 · 1 3D model Open · Scan
TFS_tr_J3KNV1_J3KNV1_HUMAN:715:827_5ei9_E_1 ModCRE Homology model AGGGCCCGCGCCGGGCC Region 715-827 · 1 3D model Open · Scan
TFS_tr_J3KNV1_J3KNV1_HUMAN:718:827_5eh2_F_1 ModCRE Homology model GTACCCACTGCGTGGCCCT Region 718-827 · 1 3D model Open · Scan
TFS_tr_J3KNV1_J3KNV1_HUMAN:719:827_5t0u_A_1 ModCRE Homology model AACGCCCTATTACTATTAAAG Region 719-827 · 1 3D model Open · Scan
TFS_tr_J3KNV1_J3KNV1_HUMAN:722:799_5ke7_A_1 ModCRE Homology model GCCCCCCCAA Region 722-799 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 2718 aa
715-827

Region 715-827 6 PWM

Residues
113 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 5EGB, 5EH2, 5EI9, 5KE7, 5T0U
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 715-8276 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_J3KNV1_J3KNV1_HUMAN:719:747_1llm_C_1 1llm 719-747 View model · PDB
Predicted = Low TFS_tr_J3KNV1_J3KNV1_HUMAN:715:827_5egb_A_1 5egb 715-827 View model · PDB
Predicted = Low TFS_tr_J3KNV1_J3KNV1_HUMAN:715:827_5ei9_E_1 5ei9 715-827 View model · PDB
Predicted = Low TFS_tr_J3KNV1_J3KNV1_HUMAN:718:827_5eh2_F_1 5eh2 718-827 View model · PDB
Predicted = Low TFS_tr_J3KNV1_J3KNV1_HUMAN:719:827_5t0u_A_1 5t0u 719-827 View model · PDB
Predicted = Low TFS_tr_J3KNV1_J3KNV1_HUMAN:722:799_5ke7_A_1 5ke7 722-799 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 675:827 719,719 747,747 P:C,D · DNA:A,B 41.4% / 58.6% 33,34 View · PDB DIMER_tr_J3KNV1_J3KNV1_HUMAN:719:747_1llm_C_1
5 5ke7 675:827 722 799 P:A · DNA:B,C 33.3% / 44.9% 88 View · PDB TFS_tr_J3KNV1_J3KNV1_HUMAN:722:799_5ke7_A_1
1 5ei9 675:827 715 827 P:E · DNA:A,B 29.2% / 46.9% 99 View · PDB TFS_tr_J3KNV1_J3KNV1_HUMAN:715:827_5ei9_E_1
2 5egb 675:827 715 827 P:A · DNA:C,D 29.2% / 46.9% 99 View · PDB TFS_tr_J3KNV1_J3KNV1_HUMAN:715:827_5egb_A_1
3 5eh2 675:827 718 827 P:F · DNA:C,D 29.1% / 47.3% 98 View · PDB TFS_tr_J3KNV1_J3KNV1_HUMAN:718:827_5eh2_F_1
4 5t0u 675:827 719 827 P:A · DNA:B,C 27.5% / 40.4% 62 View · PDB TFS_tr_J3KNV1_J3KNV1_HUMAN:719:827_5t0u_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
242-464PF25580Zinc finger protein Rlf-like, TPR repeatsNo overlap with loaded model regions
526-558PF25420ZN292-like C2H2 zinc fingerNo overlap with loaded model regions
802-826PF00096Zinc finger, C2H2 typeoverlaps 715-827
2153-2207PF26218Zinc finger protein 292, C2H2-type zinc fingerNo overlap with loaded model regions
2364-2421PF26218Zinc finger protein 292, C2H2-type zinc fingerNo overlap with loaded model regions