Region 755-790 2 PWM
- Residues
- 36 aa
- Domains
- PF21319 · Zinc finger, FCS-type PF16616 · Unstructured region on Polyhomeotic-like protein 1 and 2
- 3D models
- 2 active PDBs · 2 summary rows
- Templates
- 5VMZ, 6DF9
- Sources
- Predicted = Low
Transcription factor
J3KQH6 - PHC1
Polyhomeotic homolog 1
Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 959 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known0
No generated PWM in this category.
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE2
| Motif | Prediction | Source | DNA binding | Support | Logo | Actions |
|---|---|---|---|---|---|---|
| TFS_tr_J3KQH6_J3KQH6_HUMAN:755:790_5vmz_A_1 | ModCRE | Homology model | CCAAACTGGTAA | Region 755-790 · 1 3D model | Open · Scan | |
| TFS_tr_J3KQH6_J3KQH6_HUMAN:755:790_6df9_A_1 | ModCRE | Homology model | CGGGTTTGTCAA | Region 755-790 · 1 3D model | Open · Scan |
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
959 aa
755-790
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
2 active PDB models
2 summary rows
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 755-7902 models · 2 summary rows
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_tr_J3KQH6_J3KQH6_HUMAN:755:790_5vmz_A_1 | 5vmz | 755-790 | View model · PDB |
| Predicted = Low | TFS_tr_J3KQH6_J3KQH6_HUMAN:755:790_6df9_A_1 | 6df9 | 755-790 | View model · PDB |
Model-summary evidence imported for this region.
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 753-782 | PF21319 | Zinc finger, FCS-type | overlaps 755-790 |
| 783-890 | PF16616 | Unstructured region on Polyhomeotic-like protein 1 and 2 | overlaps 755-790 |
| 894-957 | PF00536 | SAM domain (Sterile alpha motif) | No overlap with loaded model regions |