ModCRE DB

Transcription factor

J3KQR4 - ZNF418

Zinc finger protein 418

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 697 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07712_2.00 Known CisBP ACATTTTTTTAATCTAAAAAAACATTTACA Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 697 aa
253-411

Region 253-411 0 PWM

Residues
159 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 253-4111 model
Actions
Predicted = Low TFS_J3KQR4:253:411_5t0u_A_1 5t0u 253-411 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
26-66PF01352KRAB boxNo overlap with loaded model regions
252-273PF00096Zinc finger, C2H2 typeoverlaps 253-411
279-301PF00096Zinc finger, C2H2 typeoverlaps 253-411
307-329PF00096Zinc finger, C2H2 typeoverlaps 253-411
335-357PF00096Zinc finger, C2H2 typeoverlaps 253-411
363-385PF00096Zinc finger, C2H2 typeoverlaps 253-411
391-413PF00096Zinc finger, C2H2 typeoverlaps 253-411
419-441PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
447-469PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
475-497PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
503-525PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
531-553PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
559-581PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
612-634PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
640-662PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
668-690PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions