ModCRE DB

Transcription factor

J3KTI4 - ZNF521

Zinc finger protein 521

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1091 aa

14 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M10151_2.00 NN 70-40% CisBP GCACCCTTGGGTGC 62.4% identity Open · Scan
M02669_2.00 NN 70-40% CisBP GCACCCCTGGGTGCC 62.0% identity Open · Scan
MA0116.1 NN 70-40% JASPAR GGCACCCAGGGGTGC 61.2% identity Open · Scan
ModCRE11
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_J3KTI4_J3KTI4_HUMAN:710:748_1llm_D_1 ModCRE Homology model AAACCGCGCGAA Region 710-748 · 1 3D model Open · Scan
TFS_tr_J3KTI4_J3KTI4_HUMAN:414:623_5v3j_E_1 ModCRE Homology model AGGGGGGGCCGGCACGGCCCCC Region 414-623 · 1 3D model Open · Scan
TFS_tr_J3KTI4_J3KTI4_HUMAN:414:623_5v3m_C_1 ModCRE Homology model GGGGGGGGTGGCGCCGGCCCCG Region 414-623 · 1 3D model Open · Scan
TFS_tr_J3KTI4_J3KTI4_HUMAN:414:685_5wjq_D_1 ModCRE Homology model GCCGGGTCCCCCGGAGGCTGGGCCCGCC Region 414-685 · 1 3D model Open · Scan
TFS_tr_J3KTI4_J3KTI4_HUMAN:416:607_7w1m_H_1 ModCRE Homology model TGTACGGAGGGGGCTACCGAAGCGGACGGT Region 416-607 · 1 3D model Open · Scan
TFS_tr_J3KTI4_J3KTI4_HUMAN:474:609_2i13_A_1 ModCRE Homology model CCCCCGGATAGGTATCGGGTG Region 474-609 · 1 3D model Open · Scan
TFS_tr_J3KTI4_J3KTI4_HUMAN:476:563_5k5h_A_1 ModCRE Homology model GTACCTACGCGC Region 476-563 · 1 3D model Open · Scan
TFS_tr_J3KTI4_J3KTI4_HUMAN:476:563_5kkq_A_1 ModCRE Homology model CGCGCGGCGGAGAGTGA Region 476-563 · 1 3D model Open · Scan
TFS_tr_J3KTI4_J3KTI4_HUMAN:476:563_5t00_A_1 ModCRE Homology model CGCGCGCCGCCTGTTGG Region 476-563 · 1 3D model Open · Scan
TFS_tr_J3KTI4_J3KTI4_HUMAN:476:563_5yeg_A_1 ModCRE Homology model CAGCCCGCGTTGCCC Region 476-563 · 1 3D model Open · Scan
TFS_tr_J3KTI4_J3KTI4_HUMAN:476:563_5yeh_A_1 ModCRE Homology model CCCCGGCCGCCAAAA Region 476-563 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1091 aa
414-685
710-748

Region 414-685 10 PWM

Residues
272 aa
Domains
PF13912 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
10 active PDBs · 5 summary rows
Templates
2I13, 5K5H, 5KKQ, 5T00, 5V3J, 5V3M, 5WJQ, 5YEG, ...
Sources
Predicted = Low
Scan this region Show models

Region 710-748 1 PWM

Residues
39 aa
Domains
PF13912 · C2H2-type zinc finger PF13912 · C2H2-type zinc finger
3D models
1 active PDB · 1 summary row
Templates
1LLM
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models 6 summary rows
Region 414-68510 models · 5 summary rows
Actions
Predicted = Low TFS_tr_J3KTI4_J3KTI4_HUMAN:414:623_5v3j_E_1 5v3j 414-623 View model · PDB
Predicted = Low TFS_tr_J3KTI4_J3KTI4_HUMAN:414:623_5v3m_C_1 5v3m 414-623 View model · PDB
Predicted = Low TFS_tr_J3KTI4_J3KTI4_HUMAN:414:685_5wjq_D_1 5wjq 414-685 View model · PDB
Predicted = Low TFS_tr_J3KTI4_J3KTI4_HUMAN:416:607_7w1m_H_1 7w1m 416-607 View model · PDB
Predicted = Low TFS_tr_J3KTI4_J3KTI4_HUMAN:474:609_2i13_A_1 2i13 474-609 View model · PDB
Predicted = Low TFS_tr_J3KTI4_J3KTI4_HUMAN:476:563_5k5h_A_1 5k5h 476-563 View model · PDB
Predicted = Low TFS_tr_J3KTI4_J3KTI4_HUMAN:476:563_5kkq_A_1 5kkq 476-563 View model · PDB
Predicted = Low TFS_tr_J3KTI4_J3KTI4_HUMAN:476:563_5t00_A_1 5t00 476-563 View model · PDB
Predicted = Low TFS_tr_J3KTI4_J3KTI4_HUMAN:476:563_5yeg_A_1 5yeg 476-563 View model · PDB
Predicted = Low TFS_tr_J3KTI4_J3KTI4_HUMAN:476:563_5yeh_A_1 5yeh 476-563 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 2i13 342:685 474 609 P:A · DNA:C,D 31.2% / 43.5% 86 View · PDB TFS_tr_J3KTI4_J3KTI4_HUMAN:474:609_2i13_A_1
2 5v3m 342:685 414 623 P:C · DNA:A,B 28.8% / 40.6% 72 View · PDB TFS_tr_J3KTI4_J3KTI4_HUMAN:414:623_5v3m_C_1
3 5v3j 342:685 414 623 P:E · DNA:A,B 28.8% / 40.6% 72 View · PDB TFS_tr_J3KTI4_J3KTI4_HUMAN:414:623_5v3j_E_1
1 5wjq 342:685 414 685 P:D · DNA:A,B 27.8% / 38.8% 93 View · PDB TFS_tr_J3KTI4_J3KTI4_HUMAN:414:685_5wjq_D_1
4 7w1m 342:685 416 607 P:H · DNA:F,G 26.5% / 41.3% 57 View · PDB TFS_tr_J3KTI4_J3KTI4_HUMAN:416:607_7w1m_H_1
Region 710-7481 model · 1 summary row
Actions
Predicted = Low DIMER_tr_J3KTI4_J3KTI4_HUMAN:710:748_1llm_D_1 1llm 710-748 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 342:685 710,710 748,748 P:C,D · DNA:A,B 38.5% / 59.0% 43,44 View · PDB DIMER_tr_J3KTI4_J3KTI4_HUMAN:710:748_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
92-114PF13912C2H2-type zinc fingerNo overlap with loaded model regions
216-241PF13912C2H2-type zinc fingerNo overlap with loaded model regions
414-438PF13912C2H2-type zinc fingeroverlaps 414-685
445-466PF00096Zinc finger, C2H2 typeoverlaps 414-685
474-497PF00096Zinc finger, C2H2 typeoverlaps 414-685
710-733PF13912C2H2-type zinc fingeroverlaps 710-748
738-763PF13912C2H2-type zinc fingeroverlaps 710-748
1036-1059PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions