ModCRE DB

Transcription factor

J3QLN9 - DMTF1

Cyclin-D-binding Myb-like transcription factor 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 365 aa

5 Generated PWM 5 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_J3QLN9_J3QLN9_HUMAN:163:284_5eyb_A_1 ModCRE Homology model GGGGCGCAAAGGGGTAA Region 163-284 · 1 3D model Open · Scan
TFS_tr_J3QLN9_J3QLN9_HUMAN:185:249_3osf_A_1 ModCRE Homology model TCAAACTTGTCAA Region 185-249 · 1 3D model Open · Scan
TFS_tr_J3QLN9_J3QLN9_HUMAN:185:249_3osg_A_1 ModCRE Homology model TAAACGTTTAAG Region 185-249 · 1 3D model Open · Scan
TFS_tr_J3QLN9_J3QLN9_HUMAN:185:303_1h88_C_1 ModCRE Homology model CATTCCCGTTAGGAG Region 185-303 · 1 3D model Open · Scan
TFS_tr_J3QLN9_J3QLN9_HUMAN:265:303_1h8a_C_1 ModCRE Homology model ACCTGAGGTTTGGGC Region 265-303 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 365 aa
163-303

Region 163-303 5 PWM

Residues
141 aa
Domains
PF00249 · Myb-like DNA-binding domain PF00249 · Myb-like DNA-binding domain
3D models
5 active PDBs · 5 summary rows
Templates
1H88, 1H8A, 3OSF, 3OSG, 5EYB
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
5 active PDB models 5 summary rows
Region 163-3035 models · 5 summary rows
Actions
Predicted = Low TFS_tr_J3QLN9_J3QLN9_HUMAN:163:284_5eyb_A_1 5eyb 163-284 View model · PDB
Predicted = Low TFS_tr_J3QLN9_J3QLN9_HUMAN:185:249_3osf_A_1 3osf 185-249 View model · PDB
Predicted = Low TFS_tr_J3QLN9_J3QLN9_HUMAN:185:249_3osg_A_1 3osg 185-249 View model · PDB
Predicted = Low TFS_tr_J3QLN9_J3QLN9_HUMAN:185:303_1h88_C_1 1h88 185-303 View model · PDB
Predicted = Low TFS_tr_J3QLN9_J3QLN9_HUMAN:265:303_1h8a_C_1 1h8a 265-303 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 1h8a 140:313 265 303 P:C · DNA:D,E 38.5% / 64.1% 36 View · PDB TFS_tr_J3QLN9_J3QLN9_HUMAN:265:303_1h8a_C_1
2 3osf 140:313 185 249 P:A · DNA:B,C 35.8% / 53.7% 63 View · PDB TFS_tr_J3QLN9_J3QLN9_HUMAN:185:249_3osf_A_1
3 3osg 140:313 185 249 P:A · DNA:B,C 35.8% / 53.7% 59 View · PDB TFS_tr_J3QLN9_J3QLN9_HUMAN:185:249_3osg_A_1
4 1h88 140:313 185 303 P:C · DNA:D,E 30.3% / 53.3% 71 View · PDB TFS_tr_J3QLN9_J3QLN9_HUMAN:185:303_1h88_C_1
1 5eyb 140:313 163 284 P:A · DNA:C,D 29.6% / 48.8% 32 View · PDB TFS_tr_J3QLN9_J3QLN9_HUMAN:163:284_5eyb_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
37-115PF20588Cyclin-D-binding Myb-like transcription factor 1 N-terminalNo overlap with loaded model regions
184-224PF00249Myb-like DNA-binding domainoverlaps 163-303
233-288PF00249Myb-like DNA-binding domainoverlaps 163-303