ModCRE DB

Transcription factor

J3QQI2 - ZNF521

Zinc finger protein 521

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 184 aa

6 Generated PWM 3 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)3
MotifPredictionSourceDNA bindingSupportLogoActions
M02669_2.00 NN 70-40% CisBP GCACCCCTGGGTGCC 50.8% identity Open · Scan
M10151_2.00 NN 70-40% CisBP GCACCCTTGGGTGC 50.8% identity Open · Scan
MA0116.1 NN 70-40% JASPAR GGCACCCAGGGGTGC 50.8% identity Open · Scan
ModCRE3
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_J3QQI2_J3QQI2_HUMAN:151:175_5ke8_A_1 ModCRE Homology model GCCCCCTTA Region 151-175 · 1 3D model Open · Scan
TFS_tr_J3QQI2_J3QQI2_HUMAN:151:175_5ke9_A_1 ModCRE Homology model TACGAAATG Region 151-175 · 1 3D model Open · Scan
TFS_tr_J3QQI2_J3QQI2_HUMAN:21:40_2i13_A_1 ModCRE Homology model ATAAGAGTTTT Region 21-40 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 184 aa
21-40
151-175

Region 21-40 1 PWM

Residues
20 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB · 1 summary row
Templates
2I13
Sources
Predicted = Low
Scan this region Show models

Region 151-175 2 PWM

Residues
25 aa
Domains
No overlapping PFAM annotation recorded
3D models
2 active PDBs · 2 summary rows
Templates
5KE8, 5KE9
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
3 active PDB models 3 summary rows
Region 21-401 model · 1 summary row
Actions
Predicted = Low TFS_tr_J3QQI2_J3QQI2_HUMAN:21:40_2i13_A_1 2i13 21-40 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
3 2i13 151:175 21 40 P:A · DNA:C,D 50.0% / 60.0% 13 View · PDB TFS_tr_J3QQI2_J3QQI2_HUMAN:21:40_2i13_A_1
Region 151-1752 models · 2 summary rows
Actions
Predicted = Low TFS_tr_J3QQI2_J3QQI2_HUMAN:151:175_5ke8_A_1 5ke8 151-175 View model · PDB
Predicted = Low TFS_tr_J3QQI2_J3QQI2_HUMAN:151:175_5ke9_A_1 5ke9 151-175 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 5ke9 151:175 151 175 P:A · DNA:B,C 28.0% / 48.0% 28 View · PDB TFS_tr_J3QQI2_J3QQI2_HUMAN:151:175_5ke9_A_1
2 5ke8 151:175 151 175 P:A · DNA:B,C 28.0% / 48.0% 29 View · PDB TFS_tr_J3QQI2_J3QQI2_HUMAN:151:175_5ke8_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
97-119PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions