ModCRE DB

Transcription factor

J9JIC7 - VEZF1

Vascular endothelial zinc finger 1

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 340 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
MA1578.1 NN 70+% JASPAR CCCCCCACTT 98.2% identity Open · Scan
M08864_2.00 NN 70+% CisBP CCTCCCCCCCCGCCCCCTCCCC 72.3% identity Open · Scan
Nearest Neighbor (70% - 40%)6
MotifPredictionSourceDNA bindingSupportLogoActions
MA1522.1 NN 70-40% JASPAR CGCCCCTCCCC 64.8% identity Open · Scan
M08870_2.00 NN 70-40% CisBP CCCCCCCCCCCCCCCCTCCCCC 58.3% identity Open · Scan
M00019_2.00 NN 70-40% CisBP ACCCCTAATT 55.8% identity Open · Scan
M01531_2.00 NN 70-40% CisBP CCCCCCCTAAAT 55.8% identity Open · Scan
MA0753.1 NN 70-40% JASPAR CCCCCCCCAC 50.8% identity Open · Scan
M08417_2.00 NN 70-40% CisBP TACCTA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 340 aa
12-76

Region 12-76 0 PWM

Residues
65 aa
Domains
PF13894 · C2H2-type zinc finger PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
1P47
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 12-761 model
Actions
Predicted = Low TFS_J9JIC7:12:76_1p47_A_1 1p47 12-76 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
15-37PF13894C2H2-type zinc fingeroverlaps 12-76
45-68PF00096Zinc finger, C2H2 typeoverlaps 12-76