ModCRE DB

Transcription factor

J9RYE1

FKHR-PAX3 fusion protein isoform c

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 298 aa

22 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)6
MotifPredictionSourceDNA bindingSupportLogoActions
M10549_2.00 NN 70+% CisBP CATAAACAAA 99.5% identity Open · Scan
MA0780.1 NN 70+% JASPAR TAATCGATTA 98.8% identity Open · Scan
M09107_2.00 NN 70+% CisBP AATAAACAA 87.5% identity Open · Scan
MA0480.1 NN 70+% JASPAR TCCTGTTTACA 86.8% identity Open · Scan
M06198_2.00 NN 70+% CisBP TCGTAAACA 85.0% identity Open · Scan
M03040_2.00 NN 70+% CisBP GTAAACA 84.0% identity Open · Scan
Nearest Neighbor (70% - 40%)16
MotifPredictionSourceDNA bindingSupportLogoActions
MA0680.1 NN 70-40% JASPAR TAATCGATTA 67.8% identity Open · Scan
M05419_2.00 NN 70-40% CisBP CGATTAGTCACGGTT 66.6% identity Open · Scan
M00044_2.00 NN 70-40% CisBP GGTAAACAA 56.7% identity Open · Scan
MA0157.1 NN 70-40% JASPAR TGTAAACA 51.9% identity Open · Scan
M09669_2.00 NN 70-40% CisBP ATGTAAACACACC 51.4% identity Open · Scan
M00791_2.00 NN 70-40% CisBP ATGTAAACAA 51.3% identity Open · Scan
M03741_2.00 NN 70-40% CisBP TTATGTAAACAAT 51.3% identity Open · Scan
M10570_2.00 NN 70-40% CisBP CTTAAGTAAACAATGG 51.3% identity Open · Scan
MA0031.1 NN 70-40% JASPAR GTAAACAT 51.3% identity Open · Scan
MA0613.1 NN 70-40% JASPAR GTAAACAA 51.3% identity Open · Scan
MA0847.1 NN 70-40% JASPAR GTAAACA 51.3% identity Open · Scan
M10528_2.00 NN 70-40% CisBP ATAATAATATTTTT 51.0% identity Open · Scan
MA0614.1 NN 70-40% JASPAR GTAAACAA 51.0% identity Open · Scan
M04848_2.00 NN 70-40% CisBP AACGTCAACAC 50.0% identity Open · Scan
MA0852.1 NN 70-40% JASPAR AAAATGTAAACAAACAG 50.0% identity Open · Scan
MA1607.1 NN 70-40% JASPAR AATATGTAAACAAA 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 298 aa
160-210

Region 160-210 0 PWM

Residues
51 aa
Domains
PF00250 · Forkhead domain
3D models
1 active PDB
Templates
5DUI
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 160-2101 model
Actions
Predicted = Low DIMER_J9RYE1:160:210_5dui_A_1 5dui 160-210 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
162-209PF00250Forkhead domainoverlaps 160-210