ModCRE DB

Transcription factor

K7ELU1 - ZNF569

Zinc finger protein 569

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 710 aa

72 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)68
MotifPredictionSourceDNA bindingSupportLogoActions
M00953_2.00 NN 70-40% CisBP ATCTATAT 67.8% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 66.9% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 66.6% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 66.3% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 65.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 65.4% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 64.3% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 63.7% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 62.5% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 62.3% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 62.3% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 62.3% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 61.3% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 60.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 60.5% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 60.3% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 60.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 59.4% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 59.4% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 59.1% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 58.8% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 58.6% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 58.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 58.1% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 58.1% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 57.7% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 57.5% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 57.5% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 57.0% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 56.7% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 56.3% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 56.2% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 55.3% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 55.3% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 55.2% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 55.0% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 54.8% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 54.6% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 54.5% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 54.3% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 54.0% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 54.0% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.4% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 53.3% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.1% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 53.1% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 53.1% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.1% identity Open · Scan
M07627_2.00 NN 70-40% CisBP CAGTCACCTTCTGG 52.6% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 52.6% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 52.5% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 52.2% identity Open · Scan
M08390_2.00 NN 70-40% CisBP GCTTTGTTGACTCAC 52.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 51.9% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 51.9% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 51.8% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 51.8% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.7% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 51.5% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 51.4% identity Open · Scan
M00641_2.00 NN 70-40% CisBP ATTGACCACT 51.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.2% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 50.8% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.7% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 50.2% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 50.1% identity Open · Scan
ModCRE4
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_K7ELU1_K7ELU1_HUMAN:275:428_2i13_A_1 ModCRE Homology model GCGCAGCTGCAGCAGTTACTT Region 275-428 · 1 3D model Open · Scan
TFS_tr_K7ELU1_K7ELU1_HUMAN:321:597_5v3j_E_1 ModCRE Homology model CCCCGGGGAGGAGCCCCAGGGGGGGG Region 321-597 · 1 3D model Open · Scan
TFS_tr_K7ELU1_K7ELU1_HUMAN:321:597_5v3m_C_1 ModCRE Homology model GGGGAGTGGGGGGCGGGAGGGGGTTC Region 321-597 · 1 3D model Open · Scan
TFS_tr_K7ELU1_K7ELU1_HUMAN:347:625_5wjq_D_1 ModCRE Homology model GGGGGGCCCGGGGGGCGGGGGGGGGAAC Region 347-625 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 710 aa
275-625
628-676

Region 275-625 4 PWM

Residues
351 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
5 active PDBs · 5 summary rows
Templates
2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models

Region 628-676 0 PWM

Residues
49 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB · 1 summary row
Templates
1LLM
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 275-6255 models · 5 summary rows
Actions
Predicted = Low TFS_tr_K7ELU1_K7ELU1_HUMAN:275:428_2i13_A_1 2i13 275-428 View model · PDB
Predicted = Low TFS_tr_K7ELU1_K7ELU1_HUMAN:321:597_5v3j_E_1 5v3j 321-597 View model · PDB
Predicted = Low TFS_tr_K7ELU1_K7ELU1_HUMAN:321:597_5v3m_C_1 5v3m 321-597 View model · PDB
Predicted = Low TFS_tr_K7ELU1_K7ELU1_HUMAN:322:620_7w1m_H_1 7w1m 322-620 View model · PDB
Predicted = Low TFS_tr_K7ELU1_K7ELU1_HUMAN:347:625_5wjq_D_1 5wjq 347-625 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 243:709 275 428 P:A · DNA:C,D 60.4% / 74.0% 100 View · PDB TFS_tr_K7ELU1_K7ELU1_HUMAN:275:428_2i13_A_1
2 5v3m 243:709 321 597 P:C · DNA:A,B 55.2% / 70.4% 100 View · PDB TFS_tr_K7ELU1_K7ELU1_HUMAN:321:597_5v3m_C_1
3 5v3j 243:709 321 597 P:E · DNA:A,B 55.2% / 70.4% 100 View · PDB TFS_tr_K7ELU1_K7ELU1_HUMAN:321:597_5v3j_E_1
1 5wjq 243:709 347 625 P:D · DNA:A,B 55.2% / 70.3% 99 View · PDB TFS_tr_K7ELU1_K7ELU1_HUMAN:347:625_5wjq_D_1
5 7w1m 243:709 322 620 P:H · DNA:F,G 36.0% / 52.9% 92 View · PDB TFS_tr_K7ELU1_K7ELU1_HUMAN:322:620_7w1m_H_1
Region 628-6761 model · 1 summary row
Actions
Predicted = Low DIMER_tr_K7ELU1_K7ELU1_HUMAN:628:676_1llm_D_1 1llm 628-676 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 243:709 628,628 676,676 P:C,D · DNA:A,B 49.0% / 63.3% 56,57 View · PDB DIMER_tr_K7ELU1_K7ELU1_HUMAN:628:676_1llm_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
32-72PF01352KRAB boxNo overlap with loaded model regions
210-232PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
238-260PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
266-288PF00096Zinc finger, C2H2 typeoverlaps 275-625
294-316PF00096Zinc finger, C2H2 typeoverlaps 275-625
322-344PF00096Zinc finger, C2H2 typeoverlaps 275-625
350-372PF00096Zinc finger, C2H2 typeoverlaps 275-625
378-400PF00096Zinc finger, C2H2 typeoverlaps 275-625
406-428PF00096Zinc finger, C2H2 typeoverlaps 275-625
434-456PF00096Zinc finger, C2H2 typeoverlaps 275-625
462-484PF00096Zinc finger, C2H2 typeoverlaps 275-625
490-512PF00096Zinc finger, C2H2 typeoverlaps 275-625
518-540PF00096Zinc finger, C2H2 typeoverlaps 275-625
546-568PF00096Zinc finger, C2H2 typeoverlaps 275-625
574-596PF00096Zinc finger, C2H2 typeoverlaps 275-625
602-624PF00096Zinc finger, C2H2 typeoverlaps 275-625
630-652PF00096Zinc finger, C2H2 typeoverlaps 628-676
658-680PF00096Zinc finger, C2H2 typeoverlaps 628-676
686-708PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions