ModCRE DB

Transcription factor

K7EQC9 - ZNF420

Zinc finger protein 420

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 163 aa

158 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)24
MotifPredictionSourceDNA bindingSupportLogoActions
MA1597.1 NN 70+% JASPAR CCCAGGGAAGCCATTTC 84.2% identity Open · Scan
M07687_2.00 NN 70+% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 81.5% identity Open · Scan
M07565_2.00 NN 70+% CisBP CCTCTGGGGGCTCGTCCA 78.9% identity Open · Scan
M07657_2.00 NN 70+% CisBP CCCCTGCATGTCCCCATTTTT 77.1% identity Open · Scan
M07764_2.00 NN 70+% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 76.3% identity Open · Scan
M08921_2.00 NN 70+% CisBP CCTCATTCTTCTTGGACATG 76.3% identity Open · Scan
M08255_2.00 NN 70+% CisBP CTCTTCCGGT 76.1% identity Open · Scan
M07618_2.00 NN 70+% CisBP CCTTTGGTGCTC 76.0% identity Open · Scan
M07754_2.00 NN 70+% CisBP CGCCCCCTCCCT 75.4% identity Open · Scan
M07586_2.00 NN 70+% CisBP GGGACCCGGGTGGGGGCGTCCCCC 73.8% identity Open · Scan
M07714_2.00 NN 70+% CisBP AGCCCATTGGGGCCTATGCCC 73.6% identity Open · Scan
M07762_2.00 NN 70+% CisBP GCCGCGCACAGGCTTCTAGCC 73.6% identity Open · Scan
M07701_2.00 NN 70+% CisBP CCTGGGCTAGGCCCTGGC 73.5% identity Open · Scan
M07691_2.00 NN 70+% CisBP CCTGCAGCCACCTTGGCCTTG 72.5% identity Open · Scan
M08279_2.00 NN 70+% CisBP CCTCCCTCC 72.5% identity Open · Scan
M08335_2.00 NN 70+% CisBP AGTCGTTGTCTG 72.5% identity Open · Scan
M07646_2.00 NN 70+% CisBP CTTTTTTTT 72.2% identity Open · Scan
M07725_2.00 NN 70+% CisBP AAGCACTGTACT 72.2% identity Open · Scan
M07674_2.00 NN 70+% CisBP AAATCCTTGACAATCAAGGGTTCCCTCAC 71.0% identity Open · Scan
M07678_2.00 NN 70+% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 71.0% identity Open · Scan
M07645_2.00 NN 70+% CisBP CTCCTT 70.7% identity Open · Scan
M07707_2.00 NN 70+% CisBP TCCCGC 70.4% identity Open · Scan
MA0130.1 NN 70+% JASPAR ATCCAC 70.2% identity Open · Scan
M08263_2.00 NN 70+% CisBP ATCTCGGCACTTTGGGAGGCCA 70.0% identity Open · Scan
Nearest Neighbor (70% - 40%)134
MotifPredictionSourceDNA bindingSupportLogoActions
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 69.8% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 69.7% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 69.4% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 68.4% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 68.4% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 68.1% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 67.5% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 67.5% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 67.5% identity Open · Scan
M08234_2.00 NN 70-40% CisBP GTCAACTTGACTGGGCCA 67.5% identity Open · Scan
M07763_2.00 NN 70-40% CisBP AGAGGTTTCTT 66.6% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 66.6% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 65.9% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 65.8% identity Open · Scan
M07583_2.00 NN 70-40% CisBP GAATTTATCACCACT 65.7% identity Open · Scan
M04615_2.00 NN 70-40% CisBP CTCGATCGAAGGGCACAGTCATT 65.0% identity Open · Scan
M07595_2.00 NN 70-40% CisBP GCCTGTTCCTCTCCC 65.0% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 65.0% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 65.0% identity Open · Scan
M08312_2.00 NN 70-40% CisBP ATTGGGTTTCTGTTGCTT 65.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 65.0% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 65.0% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 64.8% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 64.4% identity Open · Scan
M07723_2.00 NN 70-40% CisBP CCGCTGCTCCCTGCT 64.0% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 63.6% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 63.6% identity Open · Scan
M07662_2.00 NN 70-40% CisBP CCTGTGTCCTCCCTGGTCCCC 63.6% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 63.6% identity Open · Scan
M08935_2.00 NN 70-40% CisBP CCTCCTCCCTCAGACC 63.6% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 63.6% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 63.1% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.1% identity Open · Scan
M08399_2.00 NN 70-40% CisBP TACTCTGGGGCCACATGACTC 63.1% identity Open · Scan
M07680_2.00 NN 70-40% CisBP AACCCCAAC 62.8% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 62.7% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 62.5% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 62.5% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 62.5% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 62.5% identity Open · Scan
M00785_2.00 NN 70-40% CisBP TTCACTTCCT 61.3% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 61.3% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 61.3% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 61.3% identity Open · Scan
MA0095.1 NN 70-40% JASPAR GCCATC 60.8% identity Open · Scan
MA0748.1 NN 70-40% JASPAR GTCCGCCATTA 60.8% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 60.5% identity Open · Scan
M07623_2.00 NN 70-40% CisBP GTCTAATAGAGCTGGGCTGCA 60.0% identity Open · Scan
M07631_2.00 NN 70-40% CisBP AATTTCAAAAATGCTATGGGC 59.5% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 59.4% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 59.4% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 59.0% identity Open · Scan
M05847_2.00 NN 70-40% CisBP AGACCTACTATGC 59.0% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 59.0% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 59.0% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 59.0% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 59.0% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 59.0% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 59.0% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 59.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.0% identity Open · Scan
MA1585.1 NN 70-40% JASPAR ATAGTAGGTG 59.0% identity Open · Scan
MA1592.1 NN 70-40% JASPAR GGTATGAGTTCTCGCT 59.0% identity Open · Scan
M07659_2.00 NN 70-40% CisBP GTCTTCCAAGTAGCTGGTGTT 58.3% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 58.1% identity Open · Scan
M07756_2.00 NN 70-40% CisBP GCGGCA 58.1% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 57.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 57.8% identity Open · Scan
MA0528.1 NN 70-40% JASPAR GGAGGAGGAGGGGGAGGAGGA 57.8% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 57.7% identity Open · Scan
M04610_2.00 NN 70-40% CisBP CGGCGACGCGAACAC 57.7% identity Open · Scan
M07654_2.00 NN 70-40% CisBP TGCCCCCTGGTGGC 57.7% identity Open · Scan
M00618_2.00 NN 70-40% CisBP TGCTACCGT 57.5% identity Open · Scan
M07627_2.00 NN 70-40% CisBP CAGTCACCTTCTGG 57.5% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 57.5% identity Open · Scan
M08903_2.00 NN 70-40% CisBP ATTCCATTCTATTCCATTCT 57.1% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 56.8% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 56.4% identity Open · Scan
M07842_2.00 NN 70-40% CisBP CTCACCTG 56.0% identity Open · Scan
M07679_2.00 NN 70-40% CisBP TGCGATCTC 55.5% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 55.2% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 55.0% identity Open · Scan
MA1588.1 NN 70-40% JASPAR GAATTCTTGGTTGAC 55.0% identity Open · Scan
M00250_2.00 NN 70-40% CisBP AATGCTAACT 54.5% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 54.5% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 54.5% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 54.5% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 54.5% identity Open · Scan
M05855_2.00 NN 70-40% CisBP GTATTATACCCAGCT 54.5% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 54.5% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 54.5% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 54.5% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 54.5% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 54.2% identity Open · Scan
M07757_2.00 NN 70-40% CisBP CCGCGGCC 53.6% identity Open · Scan
M01039_2.00 NN 70-40% CisBP CCCCCTA 53.5% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.4% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 53.3% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.3% identity Open · Scan
M07566_2.00 NN 70-40% CisBP TCAAACCATCCTTGC 53.3% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 53.3% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 53.3% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 53.3% identity Open · Scan
M07625_2.00 NN 70-40% CisBP TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 52.7% identity Open · Scan
M08275_2.00 NN 70-40% CisBP CGCTCCCGGGCCCCC 52.6% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 52.5% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 52.3% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 52.3% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 52.2% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 52.2% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 52.2% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 52.2% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 52.2% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 52.2% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 52.2% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 52.2% identity Open · Scan
M07758_2.00 NN 70-40% CisBP CGCCCTC 52.2% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 52.2% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 52.2% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 51.3% identity Open · Scan
M00613_2.00 NN 70-40% CisBP TTTTTTTC 51.1% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 51.1% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.6% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.0% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 50.0% identity Open · Scan
M03686_2.00 NN 70-40% CisBP TGATTGCTCTTTT 50.0% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 50.0% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.0% identity Open · Scan
M07703_2.00 NN 70-40% CisBP CCGACGG 50.0% identity Open · Scan
M07727_2.00 NN 70-40% CisBP CGCCGCCTCCCC 50.0% identity Open · Scan
M07731_2.00 NN 70-40% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 50.0% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.0% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 163 aa
120-162

Region 120-162 0 PWM

Residues
43 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5V3J
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 120-1621 model
Actions
Predicted = Low TFS_K7EQC9:120:162_5v3j_E_1 5v3j 120-162 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
5-46PF01352KRAB boxNo overlap with loaded model regions
139-161PF00096Zinc finger, C2H2 typeoverlaps 120-162