ModCRE DB

Transcription factor

K7EQN6 - ZNF536

Zinc finger protein 536

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 1379 aa

59 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)53
MotifPredictionSourceDNA bindingSupportLogoActions
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 61.7% identity Open · Scan
M00769_2.00 NN 70-40% CisBP ACTCCCCC 58.6% identity Open · Scan
M00909_2.00 NN 70-40% CisBP AGGACCCTGT 58.0% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 56.8% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 56.0% identity Open · Scan
M03663_2.00 NN 70-40% CisBP TTTAACCCTTTC 55.5% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 55.1% identity Open · Scan
M03690_2.00 NN 70-40% CisBP AACCACCTGTTA 55.1% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 55.1% identity Open · Scan
M00143_2.00 NN 70-40% CisBP CCCCCCCACG 54.9% identity Open · Scan
MA0753.1 NN 70-40% JASPAR CCCCCCCCAC 54.9% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 54.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 54.7% identity Open · Scan
M08275_2.00 NN 70-40% CisBP CGCTCCCGGGCCCCC 54.7% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 54.3% identity Open · Scan
M07842_2.00 NN 70-40% CisBP CTCACCTG 54.3% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 54.3% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 54.3% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 54.0% identity Open · Scan
M08919_2.00 NN 70-40% CisBP ACAGTTACA 54.0% identity Open · Scan
MA1544.1 NN 70-40% JASPAR AAAACCGTTATTTG 54.0% identity Open · Scan
M04595_2.00 NN 70-40% CisBP GTTTCCGGTAAC 53.8% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 53.8% identity Open · Scan
M00641_2.00 NN 70-40% CisBP ATTGACCACT 53.0% identity Open · Scan
MA1558.1 NN 70-40% JASPAR GGCAGGTGCA 53.0% identity Open · Scan
M06112_2.00 NN 70-40% CisBP CTACTTTCACCGGGG 52.9% identity Open · Scan
MA0751.1 NN 70-40% JASPAR GACCCCCCGCTGTGC 52.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 52.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 52.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 52.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 52.8% identity Open · Scan
M01849_2.00 NN 70-40% CisBP ACTAATTAG 52.0% identity Open · Scan
M02108_2.00 NN 70-40% CisBP CCTAATTAG 52.0% identity Open · Scan
MA0748.1 NN 70-40% JASPAR GTCCGCCATTA 52.0% identity Open · Scan
MA1651.1 NN 70-40% JASPAR GTTCCAAAATGGCTGCCTCCG 52.0% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 51.9% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 51.7% identity Open · Scan
M08194_2.00 NN 70-40% CisBP GATGGCGCCAC 51.5% identity Open · Scan
M09002_2.00 NN 70-40% CisBP CCACCTGG 51.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 50.9% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 50.9% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.9% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 50.9% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 50.9% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 50.9% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 50.9% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 50.0% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 50.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 50.0% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 50.0% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 50.0% identity Open · Scan
MA0088.1 NN 70-40% JASPAR GATTTCCCATAATGCCTTGC 50.0% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_K7EQN6_K7EQN6_HUMAN:128:176_1llm_D_1 ModCRE Homology model ATTGCGCGGGGA Region 128-176 · 1 3D model Open · Scan
TFS_tr_K7EQN6_K7EQN6_HUMAN:128:180_2i13_A_1 ModCRE Homology model TTTCTGTAGCAATGC Region 128-180 · 1 3D model Open · Scan
TFS_tr_K7EQN6_K7EQN6_HUMAN:751:802_3uk3_C_1 ModCRE Homology model ACGATGTCATC Region 751-802 · 1 3D model Open · Scan
TFS_tr_K7EQN6_K7EQN6_HUMAN:751:802_4is1_C_1 ModCRE Homology model GCGATGTCTTC Region 751-802 · 1 3D model Open · Scan
TFS_tr_K7EQN6_K7EQN6_HUMAN:751:803_3uk3_D_1 ModCRE Homology model GATGCACCCG Region 751-803 · 1 3D model Open · Scan
TFS_tr_K7EQN6_K7EQN6_HUMAN:751:803_4is1_D_1 ModCRE Homology model GATGCACTCG Region 751-803 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1379 aa
128-180
751-803

Region 128-180 2 PWM

Residues
53 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13909 · C2H2-type zinc-finger domain
3D models
2 active PDBs · 2 summary rows
Templates
1LLM, 2I13
Sources
Predicted = Low
Scan this region Show models

Region 751-803 4 PWM

Residues
53 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
4 active PDBs · 4 summary rows
Templates
3UK3, 4IS1
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 128-1802 models · 2 summary rows
Actions
Predicted = Low DIMER_tr_K7EQN6_K7EQN6_HUMAN:128:176_1llm_D_1 1llm 128-176 View model · PDB
Predicted = Low TFS_tr_K7EQN6_K7EQN6_HUMAN:128:180_2i13_A_1 2i13 128-180 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 2i13 742:812 128 180 P:A · DNA:C,D 52.8% / 64.2% 35 View · PDB TFS_tr_K7EQN6_K7EQN6_HUMAN:128:180_2i13_A_1
1 1llm 742:812 128,128 176,176 P:C,D · DNA:A,B 38.8% / 57.1% 56,57 View · PDB DIMER_tr_K7EQN6_K7EQN6_HUMAN:128:176_1llm_D_1
Region 751-8034 models · 4 summary rows
Actions
Predicted = Low TFS_tr_K7EQN6_K7EQN6_HUMAN:751:802_3uk3_C_1 3uk3 751-802 View model · PDB
Predicted = Low TFS_tr_K7EQN6_K7EQN6_HUMAN:751:802_4is1_C_1 4is1 751-802 View model · PDB
Predicted = Low TFS_tr_K7EQN6_K7EQN6_HUMAN:751:803_3uk3_D_1 3uk3 751-803 View model · PDB
Predicted = Low TFS_tr_K7EQN6_K7EQN6_HUMAN:751:803_4is1_D_1 4is1 751-803 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 4is1 742:812 751 802 P:C · DNA:A,B 63.5% / 80.8% 100 View · PDB TFS_tr_K7EQN6_K7EQN6_HUMAN:751:802_4is1_C_1
2 3uk3 742:812 751 802 P:C · DNA:A,B 63.5% / 80.8% 100 View · PDB TFS_tr_K7EQN6_K7EQN6_HUMAN:751:802_3uk3_C_1
3 4is1 742:812 751 803 P:D · DNA:A,B 62.3% / 81.1% 98 View · PDB TFS_tr_K7EQN6_K7EQN6_HUMAN:751:803_4is1_D_1
4 3uk3 742:812 751 803 P:D · DNA:A,B 62.3% / 81.1% 98 View · PDB TFS_tr_K7EQN6_K7EQN6_HUMAN:751:803_3uk3_D_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
130-152PF00096Zinc finger, C2H2 typeoverlaps 128-180
158-181PF13909C2H2-type zinc-finger domainoverlaps 128-180
345-367PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
632-653PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
657-737PF16606Unstructured conserved, between two C2H2-type zinc-fingersNo overlap with loaded model regions
753-773PF00096Zinc finger, C2H2 typeoverlaps 751-803