ModCRE DB

Transcription factor

M0QXU9 - ZNF160

Zinc finger protein 160

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 556 aa

93 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)88
MotifPredictionSourceDNA bindingSupportLogoActions
M00939_2.00 NN 70-40% CisBP CCACCTCA 69.4% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 69.4% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 68.2% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 65.8% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 65.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 65.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 64.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 64.7% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 64.1% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 63.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 63.3% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 63.1% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 62.4% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 61.4% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 61.4% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 61.1% identity Open · Scan
M08245_2.00 NN 70-40% CisBP TGGTGCCTTATTCCC 60.7% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 60.2% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 60.1% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 60.0% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 60.0% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 59.7% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 59.4% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 59.4% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 59.3% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 59.1% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 58.6% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 58.4% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 58.0% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 57.8% identity Open · Scan
M07678_2.00 NN 70-40% CisBP CCCGCCCCCTCCTCCCCCTTCCCACCC 57.4% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 57.3% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 57.2% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 57.2% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 57.0% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 56.4% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 56.1% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.9% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 55.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 55.7% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 55.4% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 55.3% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 55.1% identity Open · Scan
M04515_2.00 NN 70-40% CisBP TATGCTATAACAAGCAGCCCC 55.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 54.9% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 54.5% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 54.5% identity Open · Scan
M00786_2.00 NN 70-40% CisBP TATATATAT 54.4% identity Open · Scan
M04536_2.00 NN 70-40% CisBP ACGTAACCCGATACC 54.4% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 54.2% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 53.9% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 53.6% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 53.6% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 53.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 53.2% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.8% identity Open · Scan
M08342_2.00 NN 70-40% CisBP GCTCTGCCTCCCTCT 52.8% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 52.6% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 52.5% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 52.5% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 52.4% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 51.8% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 51.7% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 51.6% identity Open · Scan
M07618_2.00 NN 70-40% CisBP CCTTTGGTGCTC 51.4% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 51.4% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 51.4% identity Open · Scan
M07747_2.00 NN 70-40% CisBP TGGTCTATAAAGGGCCTGGTT 51.3% identity Open · Scan
M07702_2.00 NN 70-40% CisBP CTTCTTCCTTGG 51.2% identity Open · Scan
M08357_2.00 NN 70-40% CisBP GAGCCTGCTACTGAGCCTGGG 51.1% identity Open · Scan
M08366_2.00 NN 70-40% CisBP GTTTGCTGCTTACAA 51.1% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 50.9% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 50.9% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 50.8% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 50.7% identity Open · Scan
M00779_2.00 NN 70-40% CisBP GCCACGCCCA 50.6% identity Open · Scan
M03710_2.00 NN 70-40% CisBP CTCACGCCCCCC 50.6% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 50.6% identity Open · Scan
M08867_2.00 NN 70-40% CisBP CACCCCCTG 50.6% identity Open · Scan
M08392_2.00 NN 70-40% CisBP CTTCACCTGCTGAGG 50.5% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 50.4% identity Open · Scan
M07701_2.00 NN 70-40% CisBP CCTGGGCTAGGCCCTGGC 50.3% identity Open · Scan
M07731_2.00 NN 70-40% CisBP TTTCCCAGCAGCAACAGCACCGCCCCCCCC 50.3% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 50.1% identity Open · Scan
ModCRE5
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_M0QXU9_M0QXU9_HUMAN:367:418_1llm_D_1 ModCRE Homology model GGCGCGCGGCGA Region 367-418 · 1 3D model Open · Scan
TFS_tr_M0QXU9_M0QXU9_HUMAN:255:532_5wjq_D_1 ModCRE Homology model CCCTCCAGTTCCACCCCCTGGGCTGCCC Region 255-532 · 1 3D model Open · Scan
TFS_tr_M0QXU9_M0QXU9_HUMAN:256:532_5v3j_E_1 ModCRE Homology model CAGGAGTCCTGGGGGGTCCGGGGGCG Region 256-532 · 1 3D model Open · Scan
TFS_tr_M0QXU9_M0QXU9_HUMAN:256:532_5v3m_C_1 ModCRE Homology model CCCACTGATTTCTCCCCCGCCGGGCC Region 256-532 · 1 3D model Open · Scan
TFS_tr_M0QXU9_M0QXU9_HUMAN:266:419_2i13_A_1 ModCRE Homology model TCGCAGTAGCGCTATGCTATT Region 266-419 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 556 aa
255-555

Region 255-555 5 PWM

Residues
301 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 255-5556 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_M0QXU9_M0QXU9_HUMAN:367:418_1llm_D_1 1llm 367-418 View model · PDB
Predicted = Low TFS_tr_M0QXU9_M0QXU9_HUMAN:255:532_5wjq_D_1 5wjq 255-532 View model · PDB
Predicted = Low TFS_tr_M0QXU9_M0QXU9_HUMAN:256:532_5v3j_E_1 5v3j 256-532 View model · PDB
Predicted = Low TFS_tr_M0QXU9_M0QXU9_HUMAN:256:532_5v3m_C_1 5v3m 256-532 View model · PDB
Predicted = Low TFS_tr_M0QXU9_M0QXU9_HUMAN:257:555_7w1m_H_1 7w1m 257-555 View model · PDB
Predicted = Low TFS_tr_M0QXU9_M0QXU9_HUMAN:266:419_2i13_A_1 2i13 266-419 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 255:556 266 419 P:A · DNA:C,D 57.1% / 71.4% 100 View · PDB TFS_tr_M0QXU9_M0QXU9_HUMAN:266:419_2i13_A_1
1 5wjq 255:556 255 532 P:D · DNA:A,B 55.4% / 69.8% 98 View · PDB TFS_tr_M0QXU9_M0QXU9_HUMAN:255:532_5wjq_D_1
2 5v3m 255:556 256 532 P:C · DNA:A,B 54.9% / 69.3% 100 View · PDB TFS_tr_M0QXU9_M0QXU9_HUMAN:256:532_5v3m_C_1
3 5v3j 255:556 256 532 P:E · DNA:A,B 54.9% / 69.3% 100 View · PDB TFS_tr_M0QXU9_M0QXU9_HUMAN:256:532_5v3j_E_1
1 1llm 255:556 367,367 418,418 P:C,D · DNA:A,B 42.3% / 63.5% 59,61 View · PDB DIMER_tr_M0QXU9_M0QXU9_HUMAN:367:418_1llm_D_1
5 7w1m 255:556 257 555 P:H · DNA:F,G 35.4% / 49.0% 92 View · PDB TFS_tr_M0QXU9_M0QXU9_HUMAN:257:555_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
8-48PF01352KRAB boxNo overlap with loaded model regions
257-279PF00096Zinc finger, C2H2 typeoverlaps 255-555
285-307PF00096Zinc finger, C2H2 typeoverlaps 255-555
313-335PF00096Zinc finger, C2H2 typeoverlaps 255-555
341-363PF00096Zinc finger, C2H2 typeoverlaps 255-555
369-391PF00096Zinc finger, C2H2 typeoverlaps 255-555
397-419PF00096Zinc finger, C2H2 typeoverlaps 255-555
425-447PF00096Zinc finger, C2H2 typeoverlaps 255-555
453-475PF00096Zinc finger, C2H2 typeoverlaps 255-555
481-503PF00096Zinc finger, C2H2 typeoverlaps 255-555
509-531PF00096Zinc finger, C2H2 typeoverlaps 255-555
537-556PF00096Zinc finger, C2H2 typeoverlaps 255-555