ModCRE DB

Transcription factor

M0QZV4 - ZNF578

Zinc finger protein 578

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 253 aa

88 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)11
MotifPredictionSourceDNA bindingSupportLogoActions
M07747_2.00 NN 70+% CisBP TGGTCTATAAAGGGCCTGGTT 82.6% identity Open · Scan
M07586_2.00 NN 70+% CisBP GGGACCCGGGTGGGGGCGTCCCCC 78.3% identity Open · Scan
M07759_2.00 NN 70+% CisBP GGAGCGCCCCTGCCCGGC 77.7% identity Open · Scan
M07723_2.00 NN 70+% CisBP CCGCTGCTCCCTGCT 77.0% identity Open · Scan
M07701_2.00 NN 70+% CisBP CCTGGGCTAGGCCCTGGC 74.6% identity Open · Scan
M08934_2.00 NN 70+% CisBP GCTGTACCTGCTTATTAGGC 74.3% identity Open · Scan
M07754_2.00 NN 70+% CisBP CGCCCCCTCCCT 73.8% identity Open · Scan
M07618_2.00 NN 70+% CisBP CCTTTGGTGCTC 73.0% identity Open · Scan
M07761_2.00 NN 70+% CisBP CTGATTATTCACCCA 71.7% identity Open · Scan
M08274_2.00 NN 70+% CisBP TTACTTGCAGCCCAACGCATTCCTAAC 71.4% identity Open · Scan
M08255_2.00 NN 70+% CisBP CTCTTCCGGT 70.4% identity Open · Scan
Nearest Neighbor (70% - 40%)77
MotifPredictionSourceDNA bindingSupportLogoActions
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 69.9% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 69.5% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 69.2% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 67.6% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 67.5% identity Open · Scan
M07691_2.00 NN 70-40% CisBP CCTGCAGCCACCTTGGCCTTG 66.6% identity Open · Scan
M07729_2.00 NN 70-40% CisBP CCAGACTGCCTGCCAAAACCCCCT 66.6% identity Open · Scan
M08330_2.00 NN 70-40% CisBP TGGGTGCCGGACTGCTGTTCC 66.6% identity Open · Scan
M08859_2.00 NN 70-40% CisBP CATTTTTTCCTCCTAGGCCT 65.7% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 65.1% identity Open · Scan
M07725_2.00 NN 70-40% CisBP AAGCACTGTACT 65.0% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 64.5% identity Open · Scan
M07600_2.00 NN 70-40% CisBP GCATTAGC 63.8% identity Open · Scan
M08949_2.00 NN 70-40% CisBP TTCTATTTCTTCTTGTGTCA 63.0% identity Open · Scan
M08312_2.00 NN 70-40% CisBP ATTGGGTTTCTGTTGCTT 62.7% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 62.5% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 62.5% identity Open · Scan
MA0130.1 NN 70-40% JASPAR ATCCAC 62.2% identity Open · Scan
M07633_2.00 NN 70-40% CisBP CTCTCGTTGTGCCTTTGCCAT 62.1% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 61.3% identity Open · Scan
M07601_2.00 NN 70-40% CisBP CAGATGCCGGCACCATGCTTC 61.1% identity Open · Scan
M08234_2.00 NN 70-40% CisBP GTCAACTTGACTGGGCCA 60.9% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 60.8% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 60.4% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 60.4% identity Open · Scan
M07685_2.00 NN 70-40% CisBP CTTTCCAGCCAC 60.4% identity Open · Scan
M08371_2.00 NN 70-40% CisBP CCAGACTTGTCCTCT 60.4% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 60.0% identity Open · Scan
M02913_2.00 NN 70-40% CisBP TTCGTGGCATTTTTCTA 59.5% identity Open · Scan
M07750_2.00 NN 70-40% CisBP CTTCTGACACCA 59.4% identity Open · Scan
MA1594.1 NN 70-40% JASPAR AGGGGACATCACTACAGATCCCAC 59.4% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 59.1% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 58.3% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 58.1% identity Open · Scan
M07579_2.00 NN 70-40% CisBP CATCTCCAGGA 57.5% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 57.5% identity Open · Scan
M07688_2.00 NN 70-40% CisBP GAGCCCCAAGCA 57.5% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 57.1% identity Open · Scan
M07607_2.00 NN 70-40% CisBP GGCTCCACG 56.8% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 56.8% identity Open · Scan
M07650_2.00 NN 70-40% CisBP GGTCTATAAAAGGGGGGCCGCGGGGGGG 56.5% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 56.5% identity Open · Scan
MA1596.1 NN 70-40% JASPAR GCCTCAGCCTCCCGAG 56.4% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 56.0% identity Open · Scan
M04615_2.00 NN 70-40% CisBP CTCGATCGAAGGGCACAGTCATT 55.8% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 55.8% identity Open · Scan
M07674_2.00 NN 70-40% CisBP AAATCCTTGACAATCAAGGGTTCCCTCAC 55.8% identity Open · Scan
M08263_2.00 NN 70-40% CisBP ATCTCGGCACTTTGGGAGGCCA 55.8% identity Open · Scan
MA1600.1 NN 70-40% JASPAR ATACAGTCCACCCCTTTA 55.8% identity Open · Scan
M07770_2.00 NN 70-40% CisBP CTTGGACTT 55.5% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 55.3% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 55.3% identity Open · Scan
M07777_2.00 NN 70-40% CisBP GCCAATTTCCGTGGTGTAAAT 55.0% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 54.9% identity Open · Scan
M08386_2.00 NN 70-40% CisBP GCCTTAAAAGCTCAGCAC 54.3% identity Open · Scan
M07712_2.00 NN 70-40% CisBP ACATTTTTTTAATCTAAAAAAACATTTACA 54.0% identity Open · Scan
M07667_2.00 NN 70-40% CisBP CCGCACAGGCCCCCGGGCCCC 53.9% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 53.6% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 53.5% identity Open · Scan
M07645_2.00 NN 70-40% CisBP CTCCTT 53.5% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 53.4% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 53.4% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 53.4% identity Open · Scan
M07583_2.00 NN 70-40% CisBP GAATTTATCACCACT 52.9% identity Open · Scan
M07763_2.00 NN 70-40% CisBP AGAGGTTTCTT 52.6% identity Open · Scan
M00774_2.00 NN 70-40% CisBP TTAGTATACACAAGT 52.5% identity Open · Scan
M07662_2.00 NN 70-40% CisBP CCTGTGTCCTCCCTGGTCCCC 52.1% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 51.1% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 51.1% identity Open · Scan
M08300_2.00 NN 70-40% CisBP CTGCCCAATTCAT 51.1% identity Open · Scan
MA1593.1 NN 70-40% JASPAR TAACAGCAGACT 51.1% identity Open · Scan
M07638_2.00 NN 70-40% CisBP TGCAGCTCCCTGCCC 51.0% identity Open · Scan
M07656_2.00 NN 70-40% CisBP TGTCTAGTAAGTCTA 51.0% identity Open · Scan
M07680_2.00 NN 70-40% CisBP AACCCCAAC 51.0% identity Open · Scan
M07623_2.00 NN 70-40% CisBP GTCTAATAGAGCTGGGCTGCA 50.0% identity Open · Scan
M07659_2.00 NN 70-40% CisBP GTCTTCCAAGTAGCTGGTGTT 50.0% identity Open · Scan
M07717_2.00 NN 70-40% CisBP GGCTCCGCCCCC 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 253 aa
141-253

Region 141-253 0 PWM

Residues
113 aa
Domains
No overlapping PFAM annotation recorded
3D models
1 active PDB
Templates
5WJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 141-2531 model
Actions
Predicted = Low TFS_M0QZV4:141:253_5wjq_D_1 5wjq 141-253 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
24-63PF01352KRAB boxNo overlap with loaded model regions