ModCRE DB

Transcription factor

M0R087 - ZNF575

Zinc finger protein 575

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 101 aa

31 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)25
MotifPredictionSourceDNA bindingSupportLogoActions
M08239_2.00 NN 70-40% CisBP GGGCCGCTCTAGGCTGCCGG 57.1% identity Open · Scan
M01459_2.00 NN 70-40% CisBP GTAAATC 56.2% identity Open · Scan
M07631_2.00 NN 70-40% CisBP AATTTCAAAAATGCTATGGGC 55.2% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 53.4% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 52.3% identity Open · Scan
M07646_2.00 NN 70-40% CisBP CTTTTTTTT 52.3% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 52.3% identity Open · Scan
M00764_2.00 NN 70-40% CisBP GTCTACAC 51.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 51.2% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.2% identity Open · Scan
M04590_2.00 NN 70-40% CisBP TGCGCTAACCATTGC 51.1% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 50.0% identity Open · Scan
M02667_2.00 NN 70-40% CisBP TATTATCTTATCTT 50.0% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.0% identity Open · Scan
M04475_2.00 NN 70-40% CisBP GATGCACGTACCGTGCCTCA 50.0% identity Open · Scan
M07567_2.00 NN 70-40% CisBP CCACTCCACTCA 50.0% identity Open · Scan
M07588_2.00 NN 70-40% CisBP TCCTTCCCTCTTTCC 50.0% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 50.0% identity Open · Scan
M07720_2.00 NN 70-40% CisBP TGTGTGTGTGGGCATGTGTGTGTGCGAGT 50.0% identity Open · Scan
M07757_2.00 NN 70-40% CisBP CCGCGGCC 50.0% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.0% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 50.0% identity Open · Scan
M08367_2.00 NN 70-40% CisBP GGGGTGATGACCACTCTGGCTTCTTAC 50.0% identity Open · Scan
MA0029.1 NN 70-40% JASPAR AAGATAAGATAACA 50.0% identity Open · Scan
MA0163.1 NN 70-40% JASPAR GGGGCCCAAGGGGG 50.0% identity Open · Scan
ModCRE6
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_tr_M0R087_M0R087_HUMAN:61:101_1llm_C_1 ModCRE Homology model ACCGCGGCGGAA Region 61-101 · 1 3D model Open · Scan
TFS_tr_M0R087_M0R087_HUMAN:52:101_2i13_A_1 ModCRE Homology model GGGGGCTACAGAGT Region 52-101 · 1 3D model Open · Scan
TFS_tr_M0R087_M0R087_HUMAN:52:101_5v3j_E_1 ModCRE Homology model GGGGCCCCCC Region 52-101 · 1 3D model Open · Scan
TFS_tr_M0R087_M0R087_HUMAN:52:101_5v3m_C_1 ModCRE Homology model GGGGCCGCCCT Region 52-101 · 1 3D model Open · Scan
TFS_tr_M0R087_M0R087_HUMAN:52:101_5wjq_D_1 ModCRE Homology model CTTTGCCCACT Region 52-101 · 1 3D model Open · Scan
TFS_tr_M0R087_M0R087_HUMAN:60:100_8sst_A_1 ModCRE Homology model TCCCCACGCTAC Region 60-100 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 101 aa
52-101

Region 52-101 6 PWM

Residues
50 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 8SST
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 52-1016 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_M0R087_M0R087_HUMAN:61:101_1llm_C_1 1llm 61-101 View model · PDB
Predicted = Low TFS_tr_M0R087_M0R087_HUMAN:52:101_2i13_A_1 2i13 52-101 View model · PDB
Predicted = Low TFS_tr_M0R087_M0R087_HUMAN:52:101_5v3j_E_1 5v3j 52-101 View model · PDB
Predicted = Low TFS_tr_M0R087_M0R087_HUMAN:52:101_5v3m_C_1 5v3m 52-101 View model · PDB
Predicted = Low TFS_tr_M0R087_M0R087_HUMAN:52:101_5wjq_D_1 5wjq 52-101 View model · PDB
Predicted = Low TFS_tr_M0R087_M0R087_HUMAN:60:100_8sst_A_1 8sst 60-100 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
5 8sst 36:101 60 100 P:A · DNA:B,C 48.8% / 58.5% 20 View · PDB TFS_tr_M0R087_M0R087_HUMAN:60:100_8sst_A_1
1 5wjq 36:101 52 101 P:D · DNA:A,B 44.0% / 62.0% 17 View · PDB TFS_tr_M0R087_M0R087_HUMAN:52:101_5wjq_D_1
2 5v3m 36:101 52 101 P:C · DNA:A,B 44.0% / 62.0% 18 View · PDB TFS_tr_M0R087_M0R087_HUMAN:52:101_5v3m_C_1
3 5v3j 36:101 52 101 P:E · DNA:A,B 44.0% / 62.0% 18 View · PDB TFS_tr_M0R087_M0R087_HUMAN:52:101_5v3j_E_1
4 2i13 36:101 52 101 P:A · DNA:C,D 40.0% / 66.0% 33 View · PDB TFS_tr_M0R087_M0R087_HUMAN:52:101_2i13_A_1
1 1llm 36:101 61,61 101,101 P:C,D · DNA:A,B 34.1% / 48.8% 47,48 View · PDB DIMER_tr_M0R087_M0R087_HUMAN:61:101_1llm_C_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
63-85PF00096Zinc finger, C2H2 typeoverlaps 52-101