ModCRE DB

Transcription factor

M0R0C0 - ZNF71

Zinc finger protein 71

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 549 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M08267_2.00 Known CisBP CAGTTTCATTTTCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 549 aa
199-352

Region 199-352 0 PWM

Residues
154 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
2I13
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 199-3521 model
Actions
Predicted = Low TFS_M0R0C0:199:352_2i13_A_1 2i13 199-352 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
13-54PF01352KRAB boxNo overlap with loaded model regions
190-212PF00096Zinc finger, C2H2 typeoverlaps 199-352
218-240PF00096Zinc finger, C2H2 typeoverlaps 199-352
246-268PF00096Zinc finger, C2H2 typeoverlaps 199-352
274-296PF00096Zinc finger, C2H2 typeoverlaps 199-352
302-324PF00096Zinc finger, C2H2 typeoverlaps 199-352
330-352PF00096Zinc finger, C2H2 typeoverlaps 199-352
358-380PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
386-408PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
414-436PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
442-464PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
470-492PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
498-520PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
526-548PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions