ModCRE DB

Transcription factor

M0R0F3 - ZNF841

Zinc finger protein 841

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 512 aa

96 Generated PWM 6 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)92
MotifPredictionSourceDNA bindingSupportLogoActions
M00950_2.00 NN 70-40% CisBP GCAGCCCA 66.2% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 66.2% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 66.2% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 66.2% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.0% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 63.8% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.8% identity Open · Scan
M00955_2.00 NN 70-40% CisBP ACGTCCTCT 63.6% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 63.5% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 62.3% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 61.0% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 59.7% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 58.4% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 58.4% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 58.1% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 57.9% identity Open · Scan
M07706_2.00 NN 70-40% CisBP GTCTTTGAGAGGGCCCAGATGTTGGACTTA 57.7% identity Open · Scan
M07598_2.00 NN 70-40% CisBP CTGACAATACCAAGTGTTGAC 57.4% identity Open · Scan
M07764_2.00 NN 70-40% CisBP CTGCACTCTCCCCTTCCCCCCCTCCCC 57.1% identity Open · Scan
M07700_2.00 NN 70-40% CisBP ATGTTGTGAGGAAGCCCA 56.8% identity Open · Scan
M07605_2.00 NN 70-40% CisBP TATTTTTTTTTATTTTTTTTTTTTTTTTTT 56.4% identity Open · Scan
M07699_2.00 NN 70-40% CisBP GGTTTAT 56.2% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 55.8% identity Open · Scan
M00134_2.00 NN 70-40% CisBP GCCACGCCCA 55.7% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 55.7% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 55.6% identity Open · Scan
M07689_2.00 NN 70-40% CisBP ACCCAGGCTCCTTCCATCTTGTGGCTC 55.6% identity Open · Scan
M07590_2.00 NN 70-40% CisBP TTTTTTTCTTTTATTTTTTTTTTTTTTTTTTTT 55.4% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 55.3% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 55.3% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 55.1% identity Open · Scan
M07610_2.00 NN 70-40% CisBP CCTTCTTCCTCCCCCCTGCCCACC 55.1% identity Open · Scan
MA1589.1 NN 70-40% JASPAR TAGGAGTGGAATTGCTGGGTC 55.1% identity Open · Scan
M07686_2.00 NN 70-40% CisBP TAGCTTGTTTCCAGCCAC 54.7% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 54.6% identity Open · Scan
M08252_2.00 NN 70-40% CisBP CCGGCTCCAGCACCC 54.6% identity Open · Scan
M08944_2.00 NN 70-40% CisBP TACCATGCTGTTTTGATTAC 54.6% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 54.5% identity Open · Scan
M08335_2.00 NN 70-40% CisBP AGTCGTTGTCTG 54.5% identity Open · Scan
M07581_2.00 NN 70-40% CisBP TCCCCTGTGCTTCTCTCCCCT 54.2% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 54.1% identity Open · Scan
M07658_2.00 NN 70-40% CisBP CCGCCGCAGCCGCCG 54.1% identity Open · Scan
M08255_2.00 NN 70-40% CisBP CTCTTCCGGT 54.1% identity Open · Scan
M06108_2.00 NN 70-40% CisBP ACAACAACAAC 53.9% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 53.9% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 53.9% identity Open · Scan
M07635_2.00 NN 70-40% CisBP AAGTTTTCTTGTATTATATCT 53.6% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 53.4% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 53.3% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 53.2% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.2% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 53.2% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 53.2% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.2% identity Open · Scan
M07660_2.00 NN 70-40% CisBP CCGCGCCTACCTGAGGGCGCGGGCCTGGGG 52.9% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 52.8% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 52.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 52.7% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 52.6% identity Open · Scan
M05853_2.00 NN 70-40% CisBP CCACCTTTAGCCATATCT 52.6% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 52.3% identity Open · Scan
M08291_2.00 NN 70-40% CisBP AATCCAGCCCTAGACTCTCCC 52.1% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 51.8% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 51.6% identity Open · Scan
M08292_2.00 NN 70-40% CisBP TGTATTCCTTGTCATGTGTGG 51.6% identity Open · Scan
M08860_2.00 NN 70-40% CisBP TCTTATAAGGGCACTAATCCCATT 51.6% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 51.5% identity Open · Scan
MA1597.1 NN 70-40% JASPAR CCCAGGGAAGCCATTTC 51.4% identity Open · Scan
M07754_2.00 NN 70-40% CisBP CGCCCCCTCCCT 51.3% identity Open · Scan
M07593_2.00 NN 70-40% CisBP AGATGAAGTCACCCCTCTTAC 51.2% identity Open · Scan
M07657_2.00 NN 70-40% CisBP CCCCTGCATGTCCCCATTTTT 51.2% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 51.2% identity Open · Scan
M08540_2.00 NN 70-40% CisBP CCCCT 51.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 50.9% identity Open · Scan
M07587_2.00 NN 70-40% CisBP CCCCCTCCCCAGTCGAGCCCCCGC 50.9% identity Open · Scan
M02896_2.00 NN 70-40% CisBP TGCTTTCTAGGAATTCA 50.7% identity Open · Scan
MA0731.1 NN 70-40% JASPAR TGCTTTCTAGGAATTCA 50.7% identity Open · Scan
M07762_2.00 NN 70-40% CisBP GCCGCGCACAGGCTTCTAGCC 50.5% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.5% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 50.4% identity Open · Scan
M07648_2.00 NN 70-40% CisBP GCTTGCAAAAAAAATTTAACTCCCAGCTC 50.4% identity Open · Scan
M07707_2.00 NN 70-40% CisBP TCCCGC 50.4% identity Open · Scan
M08279_2.00 NN 70-40% CisBP CCTCCCTCC 50.4% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 50.3% identity Open · Scan
MA1154.1 NN 70-40% JASPAR CTTTCCCACAACACGAC 50.3% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.2% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 50.0% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 50.0% identity Open · Scan
M08908_2.00 NN 70-40% CisBP GCTGCTGCTTCTGCTG 50.0% identity Open · Scan
M08914_2.00 NN 70-40% CisBP ATTTAGTCCATTTACATTTAATGT 50.0% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 50.0% identity Open · Scan
ModCRE4
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_tr_M0R0F3_M0R0F3_HUMAN:184:460_5v3j_E_1 ModCRE Homology model CTCCCGCCCCCGGGAGCCTGGGGGCG Region 184-460 · 1 3D model Open · Scan
TFS_tr_M0R0F3_M0R0F3_HUMAN:184:460_5v3m_C_1 ModCRE Homology model CGCCCCCCCCCCCACCCCCCGGGGCC Region 184-460 · 1 3D model Open · Scan
TFS_tr_M0R0F3_M0R0F3_HUMAN:211:487_5wjq_D_1 ModCRE Homology model CCGGCCCCCCCCGACCCCCCGGGTCGCC Region 211-487 · 1 3D model Open · Scan
TFS_tr_M0R0F3_M0R0F3_HUMAN:306:459_2i13_A_1 ModCRE Homology model ACCCGCCAGCACCTACAGAGT Region 306-459 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 512 aa
184-487

Region 184-487 4 PWM

Residues
304 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
6 active PDBs · 6 summary rows
Templates
1LLM, 2I13, 5V3J, 5V3M, 5WJQ, 7W1M
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
6 active PDB models 6 summary rows
Region 184-4876 models · 6 summary rows
Actions
Predicted = Low DIMER_tr_M0R0F3_M0R0F3_HUMAN:239:290_1llm_D_1 1llm 239-290 View model · PDB
Predicted = Low TFS_tr_M0R0F3_M0R0F3_HUMAN:184:460_5v3j_E_1 5v3j 184-460 View model · PDB
Predicted = Low TFS_tr_M0R0F3_M0R0F3_HUMAN:184:460_5v3m_C_1 5v3m 184-460 View model · PDB
Predicted = Low TFS_tr_M0R0F3_M0R0F3_HUMAN:185:483_7w1m_H_1 7w1m 185-483 View model · PDB
Predicted = Low TFS_tr_M0R0F3_M0R0F3_HUMAN:211:487_5wjq_D_1 5wjq 211-487 View model · PDB
Predicted = Low TFS_tr_M0R0F3_M0R0F3_HUMAN:306:459_2i13_A_1 2i13 306-459 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
4 2i13 183:492 306 459 P:A · DNA:C,D 57.8% / 61.7% 100 View · PDB TFS_tr_M0R0F3_M0R0F3_HUMAN:306:459_2i13_A_1
1 5wjq 183:492 211 487 P:D · DNA:A,B 54.5% / 69.7% 98 View · PDB TFS_tr_M0R0F3_M0R0F3_HUMAN:211:487_5wjq_D_1
2 5v3m 183:492 184 460 P:C · DNA:A,B 53.8% / 69.0% 100 View · PDB TFS_tr_M0R0F3_M0R0F3_HUMAN:184:460_5v3m_C_1
3 5v3j 183:492 184 460 P:E · DNA:A,B 53.8% / 69.0% 100 View · PDB TFS_tr_M0R0F3_M0R0F3_HUMAN:184:460_5v3j_E_1
1 1llm 183:492 239,239 290,290 P:C,D · DNA:A,B 44.2% / 65.4% 59,61 View · PDB DIMER_tr_M0R0F3_M0R0F3_HUMAN:239:290_1llm_D_1
5 7w1m 183:492 185 483 P:H · DNA:F,G 33.8% / 50.3% 92 View · PDB TFS_tr_M0R0F3_M0R0F3_HUMAN:185:483_7w1m_H_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
161-179PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
213-235PF00096Zinc finger, C2H2 typeoverlaps 184-487
241-263PF00096Zinc finger, C2H2 typeoverlaps 184-487
269-291PF00096Zinc finger, C2H2 typeoverlaps 184-487
297-319PF00096Zinc finger, C2H2 typeoverlaps 184-487
325-347PF00096Zinc finger, C2H2 typeoverlaps 184-487
353-375PF00096Zinc finger, C2H2 typeoverlaps 184-487
381-403PF00096Zinc finger, C2H2 typeoverlaps 184-487
409-431PF00096Zinc finger, C2H2 typeoverlaps 184-487
437-459PF00096Zinc finger, C2H2 typeoverlaps 184-487
465-487PF00096Zinc finger, C2H2 typeoverlaps 184-487