ModCRE DB

Transcription factor

M0R229 - NR1H2

Nuclear receptor subfamily 1 group H member 2

Homo sapiens (Human) · Unreviewed (UniProtKB/TrEMBL) · 176 aa

110 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)32
MotifPredictionSourceDNA bindingSupportLogoActions
MA0115.1 NN 70+% JASPAR AAAGGTCAAAGGTCAAC 92.9% identity Open · Scan
M02392_2.00 NN 70+% CisBP GAGGTCAA 82.7% identity Open · Scan
M05584_2.00 NN 70+% CisBP AGAGGTCACGACCTCT 82.7% identity Open · Scan
MA1550.1 NN 70+% JASPAR AGGGGTCAAAGGTCAA 82.7% identity Open · Scan
MA0494.1 NN 70+% JASPAR TGACCTAAAGTAACCTCTG 81.8% identity Open · Scan
M05660_2.00 NN 70+% CisBP GATGTGGGTCAGTGGGTCAG 80.0% identity Open · Scan
MA1531.1 NN 70+% JASPAR GGGTCAGTAGGTCAG 80.0% identity Open · Scan
MA1532.1 NN 70+% JASPAR GGGTTAGTGGGTCAT 80.0% identity Open · Scan
M05669_2.00 NN 70+% CisBP GAGGTCAT 77.4% identity Open · Scan
MA0504.1 NN 70+% JASPAR AGGGGTCAGAGGTCA 77.4% identity Open · Scan
MA1148.1 NN 70+% JASPAR ATGTAGGTCAAAGGTCAT 75.8% identity Open · Scan
M00820_2.00 NN 70+% CisBP TAGGTCACC 75.0% identity Open · Scan
M02405_2.00 NN 70+% CisBP AGAGGTCAGT 75.0% identity Open · Scan
M05621_2.00 NN 70+% CisBP TAGGTCATGACCTA 75.0% identity Open · Scan
MA1150.1 NN 70+% JASPAR AATTAGGTCAC 75.0% identity Open · Scan
MA1151.1 NN 70+% JASPAR ATAAGTAGGTCA 75.0% identity Open · Scan
M11192_2.00 NN 70+% CisBP GGGGTCACG 73.3% identity Open · Scan
MA1110.1 NN 70+% JASPAR TCAATGACCTA 71.0% identity Open · Scan
M00812_2.00 NN 70+% CisBP AGAGGTCACG 70.9% identity Open · Scan
M02413_2.00 NN 70+% CisBP CGAGATCAA 70.9% identity Open · Scan
M05590_2.00 NN 70+% CisBP TTCAAGGTCAC 70.9% identity Open · Scan
M05599_2.00 NN 70+% CisBP AAAGGTCAA 70.9% identity Open · Scan
M09616_2.00 NN 70+% CisBP TTCAAGGTCA 70.9% identity Open · Scan
MA0071.1 NN 70+% JASPAR ATCAAGGTCA 70.9% identity Open · Scan
MA0505.1 NN 70+% JASPAR AAGTTCAAGGTCAGC 70.9% identity Open · Scan
MA1535.1 NN 70+% JASPAR CGAGGTCAC 70.9% identity Open · Scan
MA1540.1 NN 70+% JASPAR GTCAAGGTCAC 70.9% identity Open · Scan
M03426_2.00 NN 70+% CisBP GGGGTCAAAGTCCAAT 70.0% identity Open · Scan
MA0074.1 NN 70+% JASPAR GGGTCAACGAGTTCA 70.0% identity Open · Scan
MA0114.3 NN 70+% JASPAR GGGGTCAAAGTCCAAT 70.0% identity Open · Scan
MA0693.1 NN 70+% JASPAR GAGTTCATTGAGTTCA 70.0% identity Open · Scan
MA1534.1 NN 70+% JASPAR ATGAACTTT 70.0% identity Open · Scan
Nearest Neighbor (70% - 40%)78
MotifPredictionSourceDNA bindingSupportLogoActions
M02388_2.00 NN 70-40% CisBP GAGGTCA 69.6% identity Open · Scan
M06413_2.00 NN 70-40% CisBP AAATAGGTCA 69.6% identity Open · Scan
M09283_2.00 NN 70-40% CisBP TGAGGTCAAAAAAGTTCAG 69.6% identity Open · Scan
MA1533.1 NN 70-40% JASPAR ATGAACTCGATGAACTC 69.6% identity Open · Scan
M05604_2.00 NN 70-40% CisBP TAAAGGTCAC 68.9% identity Open · Scan
M09309_2.00 NN 70-40% CisBP AGGTCAGGGTGACCT 68.9% identity Open · Scan
MA0112.1 NN 70-40% JASPAR CCAGGTCACCGTGACCCC 68.9% identity Open · Scan
MA0677.1 NN 70-40% JASPAR GAGGTCAAAGGTCA 68.9% identity Open · Scan
MA1112.1 NN 70-40% JASPAR AAAAGGTCAC 68.9% identity Open · Scan
MA1539.1 NN 70-40% JASPAR AAGGTCACTGACCTT 68.9% identity Open · Scan
M02411_2.00 NN 70-40% CisBP AGGACATC 67.7% identity Open · Scan
M01300_2.00 NN 70-40% CisBP AAATTGGTAA 66.6% identity Open · Scan
M03421_2.00 NN 70-40% CisBP GGGGTCAAAGGTCA 66.6% identity Open · Scan
M06417_2.00 NN 70-40% CisBP CAGTCCGAAGGTCACCGC 66.6% identity Open · Scan
M09296_2.00 NN 70-40% CisBP TCAAGGTCA 66.6% identity Open · Scan
M11139_2.00 NN 70-40% CisBP AAGTAGGTCACCGTGACCTACTT 66.6% identity Open · Scan
MA0065.1 NN 70-40% JASPAR CCAGGGGTCAAAGGTCATCG 66.6% identity Open · Scan
MA0065.2 NN 70-40% JASPAR GTAGGGCAAAGGTCA 66.6% identity Open · Scan
MA0141.1 NN 70-40% JASPAR AGCTCAAGGTCA 66.6% identity Open · Scan
MA0141.3 NN 70-40% JASPAR TCAAGGTCATA 66.6% identity Open · Scan
MA0160.1 NN 70-40% JASPAR AAGGTCAC 66.6% identity Open · Scan
MA0484.1 NN 70-40% JASPAR AGAGTCCAAAGTCCA 66.6% identity Open · Scan
MA0643.1 NN 70-40% JASPAR TCAAGGTCAT 66.6% identity Open · Scan
M00822_2.00 NN 70-40% CisBP GAGGTCAC 65.6% identity Open · Scan
M02393_2.00 NN 70-40% CisBP AGAGGTCAC 65.6% identity Open · Scan
M05661_2.00 NN 70-40% CisBP GGGGTCAAAGGTCAG 65.6% identity Open · Scan
MA0017.1 NN 70-40% JASPAR TGACCTTTGAACCT 65.6% identity Open · Scan
MA1111.1 NN 70-40% JASPAR CAAAGGTCAAA 65.6% identity Open · Scan
M00690_2.00 NN 70-40% CisBP AAAGATCAAA 65.5% identity Open · Scan
MA1541.1 NN 70-40% JASPAR GTCAAGTTCAAGGTCAA 65.5% identity Open · Scan
M03939_2.00 NN 70-40% CisBP TAAAGGTCA 64.5% identity Open · Scan
M08226_2.00 NN 70-40% CisBP CAAGGTCA 64.5% identity Open · Scan
MA0114.1 NN 70-40% JASPAR AGGCCAAAGGTCA 64.1% identity Open · Scan
M00686_2.00 NN 70-40% CisBP AGTGATCA 63.6% identity Open · Scan
M03435_2.00 NN 70-40% CisBP GGGGTCAAAGGTCA 63.6% identity Open · Scan
M09275_2.00 NN 70-40% CisBP GGGTCACTTCAGGTCAG 63.6% identity Open · Scan
MA0855.1 NN 70-40% JASPAR GGGGTCAAAGGTCA 63.6% identity Open · Scan
M00689_2.00 NN 70-40% CisBP AAAGATCAA 63.3% identity Open · Scan
M02409_2.00 NN 70-40% CisBP GAGATCAA 63.3% identity Open · Scan
M06432_2.00 NN 70-40% CisBP AAAAATCAAAGGT 63.3% identity Open · Scan
M00703_2.00 NN 70-40% CisBP AGTCACAA 62.0% identity Open · Scan
M00814_2.00 NN 70-40% CisBP AAAGTCAAAT 62.0% identity Open · Scan
M06431_2.00 NN 70-40% CisBP AAAAGTCAAA 62.0% identity Open · Scan
MA0676.1 NN 70-40% JASPAR AAAAGTCAA 62.0% identity Open · Scan
MA0592.1 NN 70-40% JASPAR CCAAGGTCACA 61.7% identity Open · Scan
MA0592.2 NN 70-40% JASPAR TTCAAGGTCAT 61.7% identity Open · Scan
MA0859.1 NN 70-40% JASPAR AAGGTCAAAAGGTCAA 61.5% identity Open · Scan
MA1553.1 NN 70-40% JASPAR AAGGTCATGACCTT 61.5% identity Open · Scan
M00688_2.00 NN 70-40% CisBP GAAAGTACACAT 60.0% identity Open · Scan
MA0258.1 NN 70-40% JASPAR CAAGGTCACGGTGACCTG 60.0% identity Open · Scan
M05635_2.00 NN 70-40% CisBP GTGACCTCAATGAGGTCAC 59.5% identity Open · Scan
MA1574.1 NN 70-40% JASPAR GGGGTCAAAGGTCAT 59.5% identity Open · Scan
M03424_2.00 NN 70-40% CisBP AAAGGTCACCAGAGGTCA 58.9% identity Open · Scan
M05563_2.00 NN 70-40% CisBP AAAAGGTCAA 58.9% identity Open · Scan
MA0857.1 NN 70-40% JASPAR AAAGGTCAAAAGGTCA 58.9% identity Open · Scan
MA1552.1 NN 70-40% JASPAR AAGGTCATGACCTT 58.9% identity Open · Scan
M00698_2.00 NN 70-40% CisBP GGCACCAATT 58.6% identity Open · Scan
M03940_2.00 NN 70-40% CisBP TAAGTGCACGTGTACCCA 58.6% identity Open · Scan
M03382_2.00 NN 70-40% CisBP GGGAACACAATGTTCCC 58.0% identity Open · Scan
MA0727.1 NN 70-40% JASPAR GGGAACACAATGTTCCC 58.0% identity Open · Scan
M05886_2.00 NN 70-40% CisBP AGTACATTTTGTTCT 57.5% identity Open · Scan
M07987_2.00 NN 70-40% CisBP GCCCAGAACATTCTGTTCCCT 57.5% identity Open · Scan
MA0113.1 NN 70-40% JASPAR GGGAACATTATGTCCTAA 57.5% identity Open · Scan
M02414_2.00 NN 70-40% CisBP TAGTCACAAA 57.1% identity Open · Scan
M02389_2.00 NN 70-40% CisBP CAGGTCACT 56.6% identity Open · Scan
M03930_2.00 NN 70-40% CisBP AACTAGAGCAC 56.6% identity Open · Scan
MA0164.1 NN 70-40% JASPAR CAAGCTT 56.0% identity Open · Scan
M02400_2.00 NN 70-40% CisBP GGGGTCAC 55.2% identity Open · Scan
MA0856.1 NN 70-40% JASPAR GGGGTCAAAGGTCA 55.2% identity Open · Scan
M01298_2.00 NN 70-40% CisBP AAAGGTCA 54.8% identity Open · Scan
M02418_2.00 NN 70-40% CisBP CGGAAGCAAA 52.9% identity Open · Scan
M03923_2.00 NN 70-40% CisBP AGAACACTGTGTACC 52.9% identity Open · Scan
M02419_2.00 NN 70-40% CisBP TCGAGAAT 51.8% identity Open · Scan
M00705_2.00 NN 70-40% CisBP GGTCAGAAC 51.7% identity Open · Scan
MA0007.1 NN 70-40% JASPAR ATAAGAACACCCTGTACCCGCC 51.6% identity Open · Scan
MA0007.2 NN 70-40% JASPAR AAGAACAGAATGTTC 51.6% identity Open · Scan
MA0007.3 NN 70-40% JASPAR GGGAACACGGTGTACCC 51.6% identity Open · Scan
M02408_2.00 NN 70-40% CisBP TGAGGTCAATTT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 176 aa
85-115

Region 85-115 0 PWM

Residues
31 aa
Domains
PF00105 · Double treble clef zinc finger, C4 type
3D models
1 active PDB
Templates
1R0N
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 85-1151 model
Actions
Predicted = Low DIMER_M0R229:85:115_1r0n_B_1 1r0n 85-115 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
86-120PF00105Double treble clef zinc finger, C4 typeoverlaps 85-115