ModCRE DB

Transcription factor

O00470 - MEIS1

Homeobox protein Meis1

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 390 aa

8 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known8
MotifPredictionSourceDNA bindingSupportLogoActions
MA0498.2 Known JASPAR TTGACAG Direct PWM Open · Scan
MA0498.3 Known JASPAR TGACA Direct PWM Open · Scan
MA1639.1 Known JASPAR GTCATCAATCATT Direct PWM Open · Scan
MA1639.2 Known JASPAR CATCAATCA Direct PWM Open · Scan
M03165_2.00 Known CisBP TTGACAG Direct PWM Open · Scan
M09148_2.00 Known CisBP ATGATTTATGGC Direct PWM Open · Scan
M10709_2.00 Known CisBP CAGTGACAGGTC Direct PWM Open · Scan
MEIS1_HUMAN.H11MO.0.A Known HOCOMOCO ATGATTTATGGC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 390 aa
272-335

Region 272-335 0 PWM

Residues
64 aa
Domains
PF05920 · Homeobox KN domain
3D models
1 active PDB
Templates
6FQP
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 272-3351 model
Actions
Predicted = Low DIMER_O00470:272:335_6fqp_B_1 6fqp 272-335 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
71-184PF16493TALE/MEIS homeobox family N-terminal domainNo overlap with loaded model regions
290-329PF05920Homeobox KN domainoverlaps 272-335