ModCRE DB

Transcription factor

O00488 - ZNF593

Zinc finger protein 593 (Zinc finger protein T86)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 134 aa

2 Generated PWM 2 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE2
MotifPredictionSourceDNA bindingSupportLogoActions
TFS_sp_O00488_ZN593_HUMAN:57:112_2drp_A_1 ModCRE Homology model ATGCTCCACGCGTGT Region 57-112 · 1 3D model Open · Scan
TFS_sp_O00488_ZN593_HUMAN:61:81_2kmk_A_1 ModCRE Homology model GGGGTCCCCGGG Region 61-81 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 134 aa
57-112

Region 57-112 2 PWM

Residues
56 aa
Domains
PF12171 · Zinc-finger double-stranded RNA-binding
3D models
2 active PDBs · 2 summary rows
Templates
2DRP, 2KMK
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
2 active PDB models 2 summary rows
Region 57-1122 models · 2 summary rows
Actions
Predicted = Low TFS_sp_O00488_ZN593_HUMAN:57:112_2drp_A_1 2drp 57-112 View model · PDB
Predicted = Low TFS_sp_O00488_ZN593_HUMAN:61:81_2kmk_A_1 2kmk 61-81 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
2 2kmk 57:112 61 81 P:A · DNA:B,C 47.6% / 61.9% 25 View · PDB TFS_sp_O00488_ZN593_HUMAN:61:81_2kmk_A_1
1 2drp 57:112 57 112 P:A · DNA:B,C 26.8% / 48.2% 85 View · PDB TFS_sp_O00488_ZN593_HUMAN:57:112_2drp_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
61-86PF12171Zinc-finger double-stranded RNA-bindingoverlaps 57-112