ModCRE DB

Transcription factor

O14627 - CDX4

Homeobox protein CDX-4 (Caudal-type homeobox protein 4)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 284 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
MA1473.1 Known JASPAR GGCAATAAAAC Direct PWM Open · Scan
MA1473.2 Known JASPAR GCAATAAAA Direct PWM Open · Scan
M05129_2.00 Known CisBP GTTTTATTGCC Direct PWM Open · Scan
M05130_2.00 Known CisBP GGTCGTAAAAC Direct PWM Open · Scan
M05131_2.00 Known CisBP GTTTTATTGCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 284 aa
175-230

Region 175-230 0 PWM

Residues
56 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
5ZJQ
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 175-2301 model
Actions
Predicted = Low DIMER_O14627:175:230_5zjq_A_1 5zjq 175-230 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
13-170PF04731Caudal like protein activation regionNo overlap with loaded model regions
175-230PF00046Homeodomainoverlaps 175-230