ModCRE DB

Transcription factor

O14709 - ZNF197

Zinc finger protein 197 (Zinc finger protein with KRAB and SCAN domains 9) (ZnF20) (pVHL-associated KRAB domain-containing protein)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1029 aa

1 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known1
MotifPredictionSourceDNA bindingSupportLogoActions
M07684_2.00 Known CisBP CCTGTTCTTGACTTT Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1029 aa
370-530

Region 370-530 0 PWM

Residues
161 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type
3D models
1 active PDB
Templates
5T0U
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 370-5301 model
Actions
Predicted = Low TFS_O14709:370:530_5t0u_A_1 5t0u 370-530 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
39-125PF02023SCAN domainNo overlap with loaded model regions
216-256PF01352KRAB boxNo overlap with loaded model regions
398-420PF00096Zinc finger, C2H2 typeoverlaps 370-530
426-448PF00096Zinc finger, C2H2 typeoverlaps 370-530
454-476PF00096Zinc finger, C2H2 typeoverlaps 370-530
482-504PF00096Zinc finger, C2H2 typeoverlaps 370-530
510-532PF00096Zinc finger, C2H2 typeoverlaps 370-530
538-560PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
566-588PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
596-616PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
622-644PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
650-672PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
678-700PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
706-728PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
734-756PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
762-784PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
790-812PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
818-840PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
846-868PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
874-896PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
902-924PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
930-952PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
960-980PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions