ModCRE DB

Transcription factor

O15090 - ZNF536

Zinc finger protein 536

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1300 aa

62 Generated PWM 11 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)51
MotifPredictionSourceDNA bindingSupportLogoActions
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 61.7% identity Open · Scan
M00769_2.00 NN 70-40% CisBP ACTCCCCC 58.6% identity Open · Scan
M00909_2.00 NN 70-40% CisBP AGGACCCTGT 58.0% identity Open · Scan
MA1656.1 NN 70-40% JASPAR CCAAGCCCAACCAG 56.8% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 56.0% identity Open · Scan
M03663_2.00 NN 70-40% CisBP TTTAACCCTTTC 55.5% identity Open · Scan
M00149_2.00 NN 70-40% CisBP CGTACGCC 55.1% identity Open · Scan
M03690_2.00 NN 70-40% CisBP AACCACCTGTTA 55.1% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 55.1% identity Open · Scan
M00143_2.00 NN 70-40% CisBP CCCCCCCACG 54.9% identity Open · Scan
MA0753.1 NN 70-40% JASPAR CCCCCCCCAC 54.9% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 54.7% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 54.7% identity Open · Scan
M08275_2.00 NN 70-40% CisBP CGCTCCCGGGCCCCC 54.7% identity Open · Scan
M05844_2.00 NN 70-40% CisBP TCACCTGT 54.3% identity Open · Scan
M07842_2.00 NN 70-40% CisBP CTCACCTG 54.3% identity Open · Scan
MA0103.1 NN 70-40% JASPAR CACCTG 54.3% identity Open · Scan
MA0103.2 NN 70-40% JASPAR CCTCACCTG 54.3% identity Open · Scan
M08256_2.00 NN 70-40% CisBP GTGCCTT 54.0% identity Open · Scan
M08919_2.00 NN 70-40% CisBP ACAGTTACA 54.0% identity Open · Scan
MA1544.1 NN 70-40% JASPAR AAAACCGTTATTTG 54.0% identity Open · Scan
M04595_2.00 NN 70-40% CisBP GTTTCCGGTAAC 53.8% identity Open · Scan
M08347_2.00 NN 70-40% CisBP GCCCTGGGCAGC 53.8% identity Open · Scan
M00641_2.00 NN 70-40% CisBP ATTGACCACT 53.0% identity Open · Scan
MA1558.1 NN 70-40% JASPAR GGCAGGTGCA 53.0% identity Open · Scan
M06112_2.00 NN 70-40% CisBP CTACTTTCACCGGGG 52.9% identity Open · Scan
MA0751.1 NN 70-40% JASPAR GACCCCCCGCTGTGC 52.9% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 52.8% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 52.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 52.8% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 52.8% identity Open · Scan
MA0748.1 NN 70-40% JASPAR GTCCGCCATTA 52.0% identity Open · Scan
MA1651.1 NN 70-40% JASPAR GTTCCAAAATGGCTGCCTCCG 52.0% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 51.9% identity Open · Scan
M00217_2.00 NN 70-40% CisBP TTACTCAATAT 51.7% identity Open · Scan
M08194_2.00 NN 70-40% CisBP GATGGCGCCAC 51.5% identity Open · Scan
M09002_2.00 NN 70-40% CisBP CCACCTGG 51.0% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 50.9% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 50.9% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 50.9% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 50.9% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 50.9% identity Open · Scan
MA0056.1 NN 70-40% JASPAR TGGGGA 50.9% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 50.9% identity Open · Scan
M00609_2.00 NN 70-40% CisBP GGAAGCCCTA 50.0% identity Open · Scan
M00645_2.00 NN 70-40% CisBP CGCCCACGCA 50.0% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 50.0% identity Open · Scan
M03682_2.00 NN 70-40% CisBP ACGCCACGCCCAGT 50.0% identity Open · Scan
M08283_2.00 NN 70-40% CisBP GACTTTTATTTT 50.0% identity Open · Scan
MA0088.1 NN 70-40% JASPAR GATTTCCCATAATGCCTTGC 50.0% identity Open · Scan
MA0599.1 NN 70-40% JASPAR GCCCCGCCCC 50.0% identity Open · Scan
ModCRE11
MotifPredictionSourceDNA bindingSupportLogoActions
DIMER_sp_O15090_ZN536_HUMAN:128:176_1llm_D_1 ModCRE Homology model ATTGCGCGGGGA Region 128-176 · 1 3D model Open · Scan
TFS_sp_O15090_ZN536_HUMAN:126:180_1f2i_H_1 ModCRE Homology model AATTGACCTCC Region 126-180 · 1 3D model Open · Scan
TFS_sp_O15090_ZN536_HUMAN:132:180_3uk3_C_1 ModCRE Homology model GCCCGGTGACG Region 132-180 · 1 3D model Open · Scan
TFS_sp_O15090_ZN536_HUMAN:132:180_3uk3_D_1 ModCRE Homology model GATCACCCGC Region 132-180 · 1 3D model Open · Scan
TFS_sp_O15090_ZN536_HUMAN:132:180_4is1_C_1 ModCRE Homology model CCCGGCTGACA Region 132-180 · 1 3D model Open · Scan
TFS_sp_O15090_ZN536_HUMAN:132:180_4is1_D_1 ModCRE Homology model GGTCACCGGC Region 132-180 · 1 3D model Open · Scan
TFS_sp_O15090_ZN536_HUMAN:751:802_3uk3_C_1 ModCRE Homology model GACGACATCGG Region 751-802 · 1 3D model Open · Scan
TFS_sp_O15090_ZN536_HUMAN:751:802_4is1_C_1 ModCRE Homology model GATGACATCAC Region 751-802 · 1 3D model Open · Scan
TFS_sp_O15090_ZN536_HUMAN:751:803_3uk3_D_1 ModCRE Homology model CGGGGCCATC Region 751-803 · 1 3D model Open · Scan
TFS_sp_O15090_ZN536_HUMAN:751:803_4is1_D_1 ModCRE Homology model CGGGTGCGTC Region 751-803 · 1 3D model Open · Scan
TFS_sp_O15090_ZN536_HUMAN:753:801_6ki6_A_1 ModCRE Homology model CGCTTAAAGCT Region 753-801 · 1 3D model Open · Scan

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1300 aa
126-180
751-803

Region 126-180 6 PWM

Residues
55 aa
Domains
PF00096 · Zinc finger, C2H2 type PF13909 · C2H2-type zinc-finger domain
3D models
6 active PDBs · 1 summary row
Templates
1F2I, 1LLM, 3UK3, 4IS1
Sources
Predicted = Low
Scan this region Show models

Region 751-803 5 PWM

Residues
53 aa
Domains
PF00096 · Zinc finger, C2H2 type
3D models
5 active PDBs · 5 summary rows
Templates
3UK3, 4IS1, 6KI6
Sources
Predicted = Low
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
11 active PDB models 6 summary rows
Region 126-1806 models · 1 summary row
Actions
Predicted = Low DIMER_sp_O15090_ZN536_HUMAN:128:176_1llm_D_1 1llm 128-176 View model · PDB
Predicted = Low TFS_sp_O15090_ZN536_HUMAN:126:180_1f2i_H_1 1f2i 126-180 View model · PDB
Predicted = Low TFS_sp_O15090_ZN536_HUMAN:132:180_3uk3_C_1 3uk3 132-180 View model · PDB
Predicted = Low TFS_sp_O15090_ZN536_HUMAN:132:180_3uk3_D_1 3uk3 132-180 View model · PDB
Predicted = Low TFS_sp_O15090_ZN536_HUMAN:132:180_4is1_C_1 4is1 132-180 View model · PDB
Predicted = Low TFS_sp_O15090_ZN536_HUMAN:132:180_4is1_D_1 4is1 132-180 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 1llm 742:812 128,128 176,176 P:C,D · DNA:A,B 38.8% / 57.1% 56,57 View · PDB DIMER_sp_O15090_ZN536_HUMAN:128:176_1llm_D_1
Region 751-8035 models · 5 summary rows
Actions
Predicted = Low TFS_sp_O15090_ZN536_HUMAN:751:802_3uk3_C_1 3uk3 751-802 View model · PDB
Predicted = Low TFS_sp_O15090_ZN536_HUMAN:751:802_4is1_C_1 4is1 751-802 View model · PDB
Predicted = Low TFS_sp_O15090_ZN536_HUMAN:751:803_3uk3_D_1 3uk3 751-803 View model · PDB
Predicted = Low TFS_sp_O15090_ZN536_HUMAN:751:803_4is1_D_1 4is1 751-803 View model · PDB
Predicted = Low TFS_sp_O15090_ZN536_HUMAN:753:801_6ki6_A_1 6ki6 753-801 View model · PDB

Model-summary evidence imported for this region.

RankTemplateDomainN-tailsC-tailsChainsIdentity / similarityCoverageModel file
1 4is1 742:812 751 802 P:C · DNA:A,B 63.5% / 80.8% 100 View · PDB TFS_sp_O15090_ZN536_HUMAN:751:802_4is1_C_1
2 3uk3 742:812 751 802 P:C · DNA:A,B 63.5% / 80.8% 100 View · PDB TFS_sp_O15090_ZN536_HUMAN:751:802_3uk3_C_1
3 4is1 742:812 751 803 P:D · DNA:A,B 62.3% / 81.1% 98 View · PDB TFS_sp_O15090_ZN536_HUMAN:751:803_4is1_D_1
4 3uk3 742:812 751 803 P:D · DNA:A,B 62.3% / 81.1% 98 View · PDB TFS_sp_O15090_ZN536_HUMAN:751:803_3uk3_D_1
5 6ki6 742:812 753 801 P:A · DNA:C,D 53.1% / 67.3% 60 View · PDB TFS_sp_O15090_ZN536_HUMAN:753:801_6ki6_A_1

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
130-152PF00096Zinc finger, C2H2 typeoverlaps 126-180
158-181PF13909C2H2-type zinc-finger domainoverlaps 126-180
345-367PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
632-653PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
657-737PF16606Unstructured conserved, between two C2H2-type zinc-fingersNo overlap with loaded model regions
753-773PF00096Zinc finger, C2H2 typeoverlaps 751-803