ModCRE DB

Transcription factor

O15198 - SMAD9

SMAD family member 9 (SMAD 9) (Madh6) (Mothers against decapentaplegic homolog 9) (MAD homolog 9) (Mothers against DPP homolog 9)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 467 aa

3 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)3
MotifPredictionSourceDNA bindingSupportLogoActions
MA1557.1 NN 70+% JASPAR TGTCTAGACA 78.7% identity Open · Scan
M09380_2.00 NN 70+% CisBP CTCTGTCACCTG 75.0% identity Open · Scan
M09692_2.00 NN 70+% CisBP GCTGCCGGCGCGGC 72.5% identity Open · Scan
Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 467 aa
13-136

Region 13-136 0 PWM

Residues
124 aa
Domains
PF03165 · MH1 domain
3D models
1 active PDB
Templates
1OZJ
Sources
Structure model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 13-1361 model
Actions
Predicted = Low TFS_O15198:13:136_1ozj_A_1 1ozj 13-136 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
35-135PF03165MH1 domainoverlaps 13-136
271-443PF03166MH2 domainNo overlap with loaded model regions