ModCRE DB

Transcription factor

O15266 - SHOX

Short stature homeobox protein (Pseudoautosomal homeobox-containing osteogenic protein) (Short stature homeobox-containing protein)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 292 aa

7 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known7
MotifPredictionSourceDNA bindingSupportLogoActions
MA0630.1 Known JASPAR TTAATTGG Direct PWM Open · Scan
MA0630.2 Known JASPAR TAATTG Direct PWM Open · Scan
M02095_2.00 Known CisBP TTAATTGG Direct PWM Open · Scan
M03232_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M05366_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M05367_2.00 Known CisBP TTAATTAG Direct PWM Open · Scan
M05368_2.00 Known CisBP TTAACGAG Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 292 aa
116-179

Region 116-179 0 PWM

Residues
64 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 116-1791 model
Actions
Predicted = Low DIMER_O15266:116:179_1fjl_A_1 1fjl 116-179 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
118-174PF00046Homeodomainoverlaps 116-179
271-288PF03826OAR motifNo overlap with loaded model regions