Region 38-113 0 PWM
- Residues
- 76 aa
- Domains
- PF00505 · HMG (high mobility group) box
- 3D models
- 1 active PDB
- Templates
- 3U2B
- Sources
- Structure model
Transcription factor
O15370 - SOX12
Transcription factor SOX-12 (Protein SOX-22)
Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 315 aa
Motif Prediction
Only entries with a generated matrix are shown here.
Known2
Nearest Neighbor (>70%)0
No generated PWM in this category.
Nearest Neighbor (70% - 40%)0
No generated PWM in this category.
ModCRE0
No generated PWM in this category.
Model-supported DNA-binding regions
Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.
1
315 aa
38-113
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
Region 38-1131 model
| Actions | ||||
|---|---|---|---|---|
| Predicted = Low | TFS_O15370:38:113_3u2b_C_1 | 3u2b | 38-113 | View model · PDB |
View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.
Domains
Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.
| Residues | PFAM | Domain | Used by prediction region? |
|---|---|---|---|
| 40-108 | PF00505 | HMG (high mobility group) box | overlaps 38-113 |