ModCRE DB

Transcription factor

O15499 - GSC2

Homeobox protein goosecoid-2 (GSC-2) (Homeobox protein goosecoid-like) (GSC-L)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 205 aa

5 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known5
MotifPredictionSourceDNA bindingSupportLogoActions
MA0891.1 Known JASPAR CCTAATCCGC Direct PWM Open · Scan
MA0891.2 Known JASPAR TAATCC Direct PWM Open · Scan
M03080_2.00 Known CisBP CCTAATCCGC Direct PWM Open · Scan
M04920_2.00 Known CisBP CTAATCCG Direct PWM Open · Scan
M04921_2.00 Known CisBP CTAATCCC Direct PWM Open · Scan
Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 205 aa
125-184

Region 125-184 0 PWM

Residues
60 aa
Domains
PF00046 · Homeodomain
3D models
1 active PDB
Templates
1FJL
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 125-1841 model
Actions
Predicted = Low DIMER_O15499:125:184_1fjl_A_1 1fjl 125-184 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
127-183PF00046Homeodomainoverlaps 125-184