Transcription factor

O43186 - CRX

Cone-rod homeobox protein

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 299 aa

10 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known10

Motif	Prediction	Source	DNA binding	Support	Actions
M00274_2.00	Known	CisBP	GCTAATCCGA	Direct PWM	Open · Scan
M00270_2.00	Known	CisBP	CTAATCC	Direct PWM	Open · Scan
M00271_2.00	Known	CisBP	CTAATCC	Direct PWM	Open · Scan
M00272_2.00	Known	CisBP	GTTAATCC	Direct PWM	Open · Scan
M00273_2.00	Known	CisBP	TACTAATCCCT	Direct PWM	Open · Scan
M00275_2.00	Known	CisBP	GCTAATCCGC	Direct PWM	Open · Scan
M04949_2.00	Known	CisBP	CTAATCCG	Direct PWM	Open · Scan
M04950_2.00	Known	CisBP	CTAATCCC	Direct PWM	Open · Scan
M09132_2.00	Known	CisBP	CCTAATCCTCTTA	Direct PWM	Open · Scan
CRX_HUMAN.H11MO.0.B	Known	HOCOMOCO	TAAGAGGATTAGG	Direct PWM	Open · Scan

Nearest Neighbor (>70%)0

No generated PWM in this category.

Nearest Neighbor (70% - 40%)0

No generated PWM in this category.

ModCRE0

No generated PWM in this category.

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 299 aa

38-97

Scan this region Show models

3D Models

Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.

1 active PDB model

Region 38-971 model

				Actions
Predicted = Low	DIMER_O43186:38:97_1fjl_A_1	1fjl	38-97	View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

Residues	PFAM	Domain	Used by prediction region?
40-96	PF00046	Homeodomain	overlaps 38-97
164-249	PF03529	Otx1 transcription factor	No overlap with loaded model regions