ModCRE DB

Transcription factor

O43345 - ZNF208

Zinc finger protein 208 (Zinc finger protein 91-like)

Homo sapiens (Human) · Reviewed (UniProtKB/Swiss-Prot) · 1280 aa

73 Generated PWM 1 3D models

Motif Prediction

Only entries with a generated matrix are shown here.

Known0

No generated PWM in this category.

Nearest Neighbor (>70%)2
MotifPredictionSourceDNA bindingSupportLogoActions
M00955_2.00 NN 70+% CisBP ACGTCCTCT 71.7% identity Open · Scan
M07715_2.00 NN 70+% CisBP CCGCCGCCGCCGTGG 70.9% identity Open · Scan
Nearest Neighbor (70% - 40%)71
MotifPredictionSourceDNA bindingSupportLogoActions
M08381_2.00 NN 70-40% CisBP ACATTTTGTCCTCCTAGTCCT 67.3% identity Open · Scan
M00958_2.00 NN 70-40% CisBP CGGCATCCC 67.0% identity Open · Scan
M00960_2.00 NN 70-40% CisBP TGCATCCC 67.0% identity Open · Scan
M08295_2.00 NN 70-40% CisBP CTGCTGGAATCTCCA 66.6% identity Open · Scan
M00944_2.00 NN 70-40% CisBP TCGCTATAA 65.8% identity Open · Scan
M00952_2.00 NN 70-40% CisBP GGATGCTC 65.8% identity Open · Scan
M00953_2.00 NN 70-40% CisBP ATCTATAT 65.8% identity Open · Scan
M07714_2.00 NN 70-40% CisBP AGCCCATTGGGGCCTATGCCC 65.3% identity Open · Scan
M07575_2.00 NN 70-40% CisBP TCTCCAAGGCGGCCAGCA 65.1% identity Open · Scan
M08934_2.00 NN 70-40% CisBP GCTGTACCTGCTTATTAGGC 64.9% identity Open · Scan
M07565_2.00 NN 70-40% CisBP CCTCTGGGGGCTCGTCCA 64.8% identity Open · Scan
M00939_2.00 NN 70-40% CisBP CCACCTCA 64.7% identity Open · Scan
M00948_2.00 NN 70-40% CisBP GCAGCACC 64.7% identity Open · Scan
M00943_2.00 NN 70-40% CisBP CCCGCTGC 63.5% identity Open · Scan
M00959_2.00 NN 70-40% CisBP GCCCTCCC 63.5% identity Open · Scan
M00950_2.00 NN 70-40% CisBP GCAGCCCA 63.0% identity Open · Scan
M08985_2.00 NN 70-40% CisBP TGAGGACCTACTGTGTGCC 62.7% identity Open · Scan
MA1124.1 NN 70-40% JASPAR CATTCATTCATTC 61.4% identity Open · Scan
M02924_2.00 NN 70-40% CisBP AGTGTTAACAGAACACCT 61.0% identity Open · Scan
M07775_2.00 NN 70-40% CisBP GCCGAAACCCGGG 61.0% identity Open · Scan
M08921_2.00 NN 70-40% CisBP CCTCATTCTTCTTGGACATG 61.0% identity Open · Scan
M08325_2.00 NN 70-40% CisBP TTTTTTTTT 59.7% identity Open · Scan
M07687_2.00 NN 70-40% CisBP ACAAATAAGGTTCTTGTGCCCCCTGCT 59.6% identity Open · Scan
M04650_2.00 NN 70-40% CisBP GCATAACTGCCCCGCTGCC 59.5% identity Open · Scan
M07613_2.00 NN 70-40% CisBP TCACTCAGTCATTCA 59.5% identity Open · Scan
M07761_2.00 NN 70-40% CisBP CTGATTATTCACCCA 59.5% identity Open · Scan
M04653_2.00 NN 70-40% CisBP GGTACGGTTGTCCATGTTGCAA 59.3% identity Open · Scan
M07620_2.00 NN 70-40% CisBP TTGGATCTGTGGATTCATGTCTTTCAT 59.0% identity Open · Scan
M04611_2.00 NN 70-40% CisBP CTTTCGGACAC 58.6% identity Open · Scan
M08375_2.00 NN 70-40% CisBP TTCCCCATTGGCTACTGCACCGGTCCT 58.4% identity Open · Scan
MA1599.1 NN 70-40% JASPAR CGGGCCAAGCCCCTAT 58.2% identity Open · Scan
MA1587.1 NN 70-40% JASPAR CCTCGACCTCCTGA 57.5% identity Open · Scan
M00945_2.00 NN 70-40% CisBP CACCGCAC 57.4% identity Open · Scan
M07586_2.00 NN 70-40% CisBP GGGACCCGGGTGGGGGCGTCCCCC 57.1% identity Open · Scan
M08309_2.00 NN 70-40% CisBP AAAAACCCCCCTGCAGAGCCCAGCCCT 56.9% identity Open · Scan
M08329_2.00 NN 70-40% CisBP GCTGCATAGTATTCC 56.9% identity Open · Scan
M07767_2.00 NN 70-40% CisBP AAAAACCCCAGA 56.4% identity Open · Scan
M08267_2.00 NN 70-40% CisBP CAGTTTCATTTTCC 56.0% identity Open · Scan
M04613_2.00 NN 70-40% CisBP CTCATGTGCTAATTACAAA 55.7% identity Open · Scan
M08355_2.00 NN 70-40% CisBP GCGAACTCCTATTCATCC 55.7% identity Open · Scan
M08395_2.00 NN 70-40% CisBP GCTGCCTACTCTTCC 55.5% identity Open · Scan
M00782_2.00 NN 70-40% CisBP AGTGTGCGCTA 55.2% identity Open · Scan
MA1602.1 NN 70-40% JASPAR CGTCTACACGGG 55.2% identity Open · Scan
M07649_2.00 NN 70-40% CisBP CCCCCCCCCCCCTCAGGAATGCC 55.1% identity Open · Scan
M07753_2.00 NN 70-40% CisBP TGCATTCCTTGGCTTGTG 54.9% identity Open · Scan
M04465_2.00 NN 70-40% CisBP GTGATTCTTATCTTATCCTT 54.6% identity Open · Scan
M04387_2.00 NN 70-40% CisBP CGTGCTCCCC 54.3% identity Open · Scan
M08887_2.00 NN 70-40% CisBP CCTCCTCCAGGAAGCCTTCCCTGA 54.2% identity Open · Scan
M04598_2.00 NN 70-40% CisBP CGCTAACTCTCCACA 53.9% identity Open · Scan
M07578_2.00 NN 70-40% CisBP CAACTCTCC 53.7% identity Open · Scan
M07683_2.00 NN 70-40% CisBP GTGGGAAAGCCT 53.5% identity Open · Scan
MA1601.1 NN 70-40% JASPAR ATGTGGGAAA 53.5% identity Open · Scan
M07582_2.00 NN 70-40% CisBP TCCCTG 52.9% identity Open · Scan
M07733_2.00 NN 70-40% CisBP TCTTTCTCTCTCTCC 52.8% identity Open · Scan
M04621_2.00 NN 70-40% CisBP AGCAATTCCGCTCA 52.3% identity Open · Scan
M08373_2.00 NN 70-40% CisBP CCCCCTGGCTCTTCCTCT 52.2% identity Open · Scan
M01474_2.00 NN 70-40% CisBP CGCCGATCAC 52.0% identity Open · Scan
M08314_2.00 NN 70-40% CisBP ATTCATCAAGGTCCTCAACAATGG 51.8% identity Open · Scan
M08254_2.00 NN 70-40% CisBP CTGCCCTGGGACTTT 51.7% identity Open · Scan
M03671_2.00 NN 70-40% CisBP ATTACCATACAAGTGCAC 51.6% identity Open · Scan
M07562_2.00 NN 70-40% CisBP GAAAAAAAC 51.4% identity Open · Scan
M08901_2.00 NN 70-40% CisBP CCAGTTCACACC 51.4% identity Open · Scan
M04505_2.00 NN 70-40% CisBP AGCTTTTCCCACAC 51.0% identity Open · Scan
M08311_2.00 NN 70-40% CisBP CTGGAACAGAAGGGGCGA 51.0% identity Open · Scan
M01456_2.00 NN 70-40% CisBP GTGATCGGCG 50.9% identity Open · Scan
M08334_2.00 NN 70-40% CisBP TTTGTTTTTTTCTGATTGCTTTTTACTTAT 50.9% identity Open · Scan
M00142_2.00 NN 70-40% CisBP GTGCTCCT 50.7% identity Open · Scan
M07628_2.00 NN 70-40% CisBP AGTGGTTCTGCTTCT 50.7% identity Open · Scan
M08917_2.00 NN 70-40% CisBP GCTGAGCCATGTGGGGTGCT 50.5% identity Open · Scan
M01044_2.00 NN 70-40% CisBP TCTCTCTTTC 50.3% identity Open · Scan
M07659_2.00 NN 70-40% CisBP GTCTTCCAAGTAGCTGGTGTT 50.0% identity Open · Scan
ModCRE0

No generated PWM in this category.

Model-supported DNA-binding regions

Protein residue intervals where structure models support predicted PWMs. Domain annotations and modeled regions are shown together when available.

1 1280 aa
1028-1136

Region 1028-1136 0 PWM

Residues
109 aa
Domains
PF00096 · Zinc finger, C2H2 type PF00096 · Zinc finger, C2H2 type PF13465 · Zinc-finger double domain
3D models
1 active PDB
Templates
5EH2
Sources
Structure model
Scan this region Show models
3D Models
Collapsible technical table. Rows are grouped by protein region and retain model, template, residue coverage, and available summary evidence.
1 active PDB model
Region 1028-11361 model
Actions
Predicted = Low TFS_O43345:1028:1136_5eh2_F_1 5eh2 1028-1136 View model · PDB

View full model evidence table for rank, chains, N/C tails, coverage, RMSD-template information, identity/similarity, and linked model files.

Domains

Annotated protein domains. Overlaps with model-supported DNA-binding regions are shown when available.

ResiduesPFAMDomainUsed by prediction region?
3-44PF01352KRAB boxNo overlap with loaded model regions
229-248PF13912C2H2-type zinc fingerNo overlap with loaded model regions
257-279PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
286-307PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
313-335PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
341-363PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
425-447PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
453-472PF13912C2H2-type zinc fingerNo overlap with loaded model regions
511-536PF13465Zinc-finger double domainNo overlap with loaded model regions
581-603PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
609-631PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
637-659PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
665-687PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
707-732PF13465Zinc-finger double domainNo overlap with loaded model regions
777-799PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
805-827PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
833-855PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
945-967PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
1001-1023PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
1029-1051PF00096Zinc finger, C2H2 typeoverlaps 1028-1136
1057-1079PF00096Zinc finger, C2H2 typeoverlaps 1028-1136
1099-1124PF13465Zinc-finger double domainoverlaps 1028-1136
1197-1219PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions
1225-1247PF00096Zinc finger, C2H2 typeNo overlap with loaded model regions